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Basic Information
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CGSNL Gene Symbol
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SUB1C
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Gene Symbol Synonym
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Sub1C, OsSUB1C, OsERF#073, OsERF073, ERF073, OsERF73, ERF73, AP2/EREBP#122, AP2/EREBP122, SUB1B
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CGSNL Gene Name
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SUBMERGENCE 1C
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Gene Name Synonym
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submergence-1C, ethylene response factor 73, APETALA2/ethylene-responsive element binding protein 122
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Protein Name
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Allele
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Sub1C-1, Sub1C-2
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Chromosome No.
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9
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Explanation
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AP006758. EU429445: OnSub1C-1 (Oryza nivara Sub1C-1), EU429446: OrSub1C-1 (Oryza rufipogon Sub1C-1). HM117839: OrhSub1C-1-L (O. rhizomatis SUB1C-1-Like), FR720463-FR720467: OeSub1C-1-L (alleles: OeSUB1C-1-L1, OeSUB1C-1-L2, OeSUB1C-1-L3, OeSUB1C-1-L4, OeSUB1C-1-L5) (O. eichingeri SUB1C-1-Like). a group VII ethylene response factor (ERFVII). SUB1B in Hao et al. 2024.
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Trait Class
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Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK072749
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MSU ID
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LOC_Os09g11460.1
LOC_Os09g11460.2
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RAP ID
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Os09g0286600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Hao B., Zhang R., Zhang C., Wen N., Xia Y., Zhao Y., Li Q., Qiao L., Li W.
Plants (Basel) 2024 13(4)
Characterization of <i>OsPIN2</i> Mutants Reveal Novel Roles for Reactive Oxygen Species in Modulating Not Only Root Gravitropism but Also Hypoxia Tolerance in Rice Seedlings.
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Loreti E., Perata P.
Front Genet 2023 14 1213839
ERFVII transcription factors and their role in the adaptation to hypoxia in Arabidopsis and crops.
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Ma B., He S.J., Duan K.X., Yin C.C., Chen H., Yang C., Xiong Q., Song Q.X., Lu X., Chen H.W., Zhang W.K., Lu T.G., Chen S.Y., Zhang J.S.
Mol Plant 2013 6(6) 1830-48
Identification of rice ethylene-response mutants and characterization of MHZ7/OsEIN2 in distinct ethylene response and yield trait regulation.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Niroula R.K., Pucciariello C., Ho V.T., Novi G., Fukao T., Perata P.
Plant J. 2012 72(2) 282-93
SUB1A-dependent and -independent mechanisms are involved in the flooding tolerance of wild rice species.
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Gibbs D.J., Lee S.C., Isa N.M., Gramuglia S., Fukao T., Bassel G.W., Correia C.S., Corbineau F., Theodoulou F.L., Bailey-Serres J., Holdsworth M.J.
Nature 2011 479(7373) 415-8
Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants.
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Fukao T,Yeung E,Bailey-Serres J
Plant Cell 2011 23(1) 412-27
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice.
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Jung KH,Seo YS,Walia H,Cao P,Fukao T,Canlas PE,Amonpant F,Bailey-Serres J,Ronald PC
Plant Physiol. 2010 152 1674-92
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
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Fukao,T., Harris,T. and Bailey-Serres,J.
Ann. Bot. 2009 103(2) 143-150
Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice
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Fukao T., Julia Bailey-Serres
Proc. Natl. Acad. Sci. U.S.A. 2008 105(43) 16814-9
submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice.
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Fukao T, Xu K, Ronald PC, Bailey-Serres J.
Plant Cell 2006 18(8) 2021-2034
A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice.
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Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006 140(2) 411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
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Xu,K., Xu,X., Fukao,T., Canlas,P., Maghirang-Rodriguez,R., Heuer,S., Ismail,A.M., Bailey-Serres,J., Ronald,P.C. and Mackill,D.J.
Nature 2006 442(7103) 705-708
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
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TextPresso Search
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Search textpresso for SUB1C
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to anoxia( GO:0034059 )
response to hypoxia( GO:0001666 )
response to deep water( GO:0030912 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
response to flooding( GO:0009413 )
nucleus( GO:0005634 )
response to ethylene stimulus( GO:0009723 )
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Trait Ontology
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ethylene sensitivity( TO:0000173 )
submergence tolerance( TO:0000524 )
oxygen sensitivity( TO:0000015 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Jul 3, 2024
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