Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CEBIP
Gene Symbol Synonym CEBiP, Os-LYP1, LYP1, OsCEBiP
CGSNL Gene Name CHITIN ELICITOR BINDING PROTEIN
Gene Name Synonym Chitin elicitor-binding protein, chitin-elicitor binding protein, lysin motif-containing protein 1, chitin oligosaccharide elicitor-binding protein
Protein Name CHITIN ELICITOR BINDING PROTEIN
Allele Oscebip, oscebip, cebip, oscebip-1, oscerk1-2
Chromosome No. 3
Explanation Q8H8C7. a chitin receptor. a lysine motif (LysM) receptor-like protein (RLP). PDB: 5JCD, 5JCE. GO:0140426: PAMP-triggered immunity signalling pathway. GO:0038187: pattern recognition receptor activity. GO:0036377: arbuscular mycorrhizal association. GO:1900150: regulation of defense response to fungus. GO:2000023: regulation of lateral root development.
Trait Class Vegetative organ - Root
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK073032
MSU ID LOC_Os03g04110.1
LOC_Os03g04110.2
RAP ID Os03g0133400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Fan Y., Ma L., Pan X., Tian P., Wang W., Liu K., Xiong Z., Li C., Wang Z., Wang J., Zhang H., Bao Y.
Int J Mol Sci 2024  25(2) 
Genome-Wide Association Study Identifies Rice Panicle Blast-Resistant Gene <i>Pb4</i> Encoding a Wall-Associated Kinase.
Yang Y., Zhang Y., Zhang L., Zhou Z., Zhang J., Yang J., Gao X., Chen R., Huang Z., Xu Z., Li L.
Int J Mol Sci 2023  24(10) 
Isolation of <i>Bacillus siamensis</i> B-612, a Strain That Is Resistant to Rice blast disease and an Investigation of the Mechanisms Responsible for Suppressing Rice Blast Fungus.
Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022  23(2) 
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
Patel A., Sahu K.P., Mehta S., Balamurugan A., Kumar M., Sheoran N., Kumar S., Krishnappa C., Ashajyothi M., Kundu A., Goyal T., Narayanasamy P., Kumar A.
Front Microbiol 2022  13  1035602
Rice leaf endophytic <i>Microbacterium testaceum</i>: Antifungal actinobacterium confers immunocompetence against rice blast disease.
Chiu C.H., Roszak P., Orvošová M., Paszkowski U.
Curr. Biol. 2022  32(20)  4428-4437.e3
Arbuscular mycorrhizal fungi induce lateral root development in angiosperms via a conserved set of MAMP receptors.
Qiu J., Xie J., Chen Y., Shen Z., Shi H., Naqvi N.I., Qian Q., Liang Y., Kou Y.
Mol Plant 2022  15(4)  723-739
Warm temperature compromises JA-regulated basal resistance to enhance Magnaporthe oryzae infection in rice.
Nasir F., Bahadur A., Lin X., Gao Y., Tian C.
J. Exp. Bot. 2021  72(5)  1546-1557
Novel insights into host receptors and receptor-mediated signaling that regulate arbuscular mycorrhizal symbiosis.
Sahu K.P., Patel A., Kumar M., Sheoran N., Mehta S., Reddy B., Eke P., Prabhakaran N., Kumar A.
Front Microbiol 2021  12  780458
Integrated Metabarcoding and Culturomic-Based Microbiome Profiling of Rice Phyllosphere Reveal Diverse and Functional Bacterial Communities for blast disease Suppression.
Zhang C., He J., Dai H., Wang G., Zhang X., Wang C., Shi J., Chen X., Wang D., Wang E.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(16) 
Discriminating symbiosis and immunity signals by receptor competition in rice.
Wang D., Wang H., Liu Q., Tu R., Zhou X., Zhang Y., Wu W., Yu P., Chen D., Zhan X., Cao L., Cheng S., Shen X.
Plant Cell Rep. 2021  40(5)  835-850
Reduction of OsMPK6 activity by a R89K mutation induces cell death and bacterial blight resistance in rice.
Carotenuto G., Chabaud M., Miyata K., Capozzi M., Takeda N., Kaku H., Shibuya N., Nakagawa T., Barker D.G., Genre A.
New Phytol. 2017  214(4)  1440-1446
The rice LysM receptor-like kinase OsCERK1 is required for the perception of short-chain chitin oligomers in arbuscular mycorrhizal signaling.
Delteil A., Gobbato E., Cayrol B., Estevan J., Michel-Romiti C., Dievart A., Kroj T., Morel J.B.
BMC Plant Biol. 2016  16  17
Several wall-associated kinases participate positively and negatively in basal defense against rice blast fungus.
Liu S., Wang J., Han Z., Gong X., Zhang H., Chai J.
Structure 2016  24(7)  1192-200
Molecular Mechanism for Fungal Cell Wall Recognition by rice chitin receptor OsCEBiP.
You Q., Zhai K., Yang D., Yang W., Wu J., Liu J., Pan W., Wang J., Zhu X., Jian Y., Liu J., Zhang Y., Deng Y., Li Q., Lou Y., Xie Q., He Z.
Cell Host Microbe 2016  20(6)  758-769
An E3 Ubiquitin Ligase-BAG Protein Module Controls Plant Innate Immunity and Broad-Spectrum disease resistance.
Wang W., Xie Z.P., Staehelin C.
Plant J. 2014  78(1)  56-69
Functional analysis of chimeric lysin motif domain receptors mediating Nod factor-induced defense signaling in Arabidopsis thaliana and chitin-induced nodulation signaling in Lotus japonicus.
Miyata K., Kozaki T., Kouzai Y., Ozawa K., Ishii K., Asamizu E., Okabe Y., Umehara Y., Miyamoto A., Kobae Y., Akiyama K., Kaku H., Nishizawa Y., Shibuya N., Nakagawa T.
Plant Cell Physiol. 2014  55(11)  1864-72
The Bifunctional Plant Receptor, OsCERK1, Regulates Both Chitin-Triggered Immunity and Arbuscular Mycorrhizal Symbiosis in Rice.
Kouzai Y., Mochizuki S., Nakajima K., Desaki Y., Hayafune M., Miyazaki H., Yokotani N., Ozawa K., Minami E., Kaku H., Shibuya N., Nishizawa Y.
Mol. Plant Microbe Interact. 2014  27(9)  975-82
Targeted gene disruption of OsCERK1 reveals its indispensable role in chitin perception and involvement in the peptidoglycan response and immunity in rice.
Ao Y., Li Z., Feng D., Xiong F., Liu J., Li J.F., Wang M., Wang J., Liu B., Wang H.B.
Plant J. 2014   
OsCERK1 and OsRLCK176 play important roles in peptidoglycan and chitin signaling in rice innate immunity.
Hayafune M.a, Berisio R.b, Marchetti R.c, Silipo A.c, Kayama M.a, Desaki Y.a, Arima S.a, Squeglia F.b, Ruggiero A.b, Tokuyasu K.d, Molinaro A.c, Kaku H.a, Shibuya N.a
Proc. Natl. Acad. Sci. U.S.A. 2014  111  E404-E413
Chitin-induced activation of immune signaling by the rice receptor CEBiP relies on a unique sandwich-type dimerization
Liu B., Li J.F., Ao Y., Li Z., Liu J., Feng D., Qi K., He Y., Zeng L., Wang J., Wang H.B.
Plant Signal Behav 2013  8(2) 
OsLYP4 and OsLYP6 play critical roles in rice defense signal transduction.
Akamatsu A., Wong H.L., Fujiwara M., Okuda J., Nishide K., Uno K., Imai K., Umemura K., Kawasaki T., Kawano Y., Shimamoto K.
Cell Host Microbe 2013  13(4)  465-76
An OsCEBiP/OsCERK1-OsRacGEF1-OsRac1 Module Is an Essential Early Component of Chitin-Induced Rice Immunity.
Shinya T., Motoyama N., Ikeda A., Wada M., Kamiya K., Hayafune M., Kaku H., Naoto S.
Plant Cell Physiol. 2012  53(10)  1696-706
Functional characterization of CEBiP and CERK1 homologs in Arabidopsis and rice reveals the presence of different chitin receptor systems in plants.
Mentlak T.A., Kombrink A., Shinya T., Ryder L.S., Otomo I., Saitoh H., Terauchi R., Nishizawa Y., Shibuya N., Thomma B.P., Talbot N.J.
Plant Cell 2012  24(1)  322-35
Effector-mediated suppression of chitin-triggered immunity by magnaporthe oryzae is necessary for rice blast disease.
Liu B., Li J.F., Ao Y., Qu J., Li Z., Su J., Zhang Y., Liu J., Feng D., Qi K., He Y., Wang J., Wang H.B.
Plant Cell 2012  24(8)  3406-19
Lysin Motif-Containing Proteins LYP4 and LYP6 Play Dual Roles in Peptidoglycan and Chitin Perception in Rice Innate Immunity.
Kishimoto K., Kouzai Y., Kaku H., Shibuya N., Minami E., Nishizawa Y.
Plant J. 2010  64(2)  343-354
Perception of the chitin oligosaccharides contributes to disease resistance to blast fungus Magnaporthe oryzae in rice.
Shimizu T., Nakano T., Takamizawa D., Desaki Y., Ishii-Minami N., Nishizawa Y., Minami E., Okada K., Yamane H., Kaku H., Shibuya N.
Plant J. 2010  64(2)  204-214
Two LysM receptor molecules, CEBiP and OsCERK1, cooperatively regulate chitin elicitor signaling in rice.
Miya A,Albert P,Shinya T,Desaki Y,Ichimura K,Shirasu K,Narusaka Y,Kawakami N,Kaku H,Shibuya N
Proc. Natl. Acad. Sci. U.S.A. 2007  104  19613-8
CERK1, a LysM receptor kinase, is essential for chitin elicitor signaling in Arabidopsis.
Kaku,H., Nishizawa,Y., Ishii-Minami,N., Akimoto-Tomiyama,C., Dohmae,N., Takio,K., Minami,E. and Shibuya,N.
Proc. Natl. Acad. Sci. U.S.A. 2006  103(29)  11086-11091
Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor.
TextPresso Search Search textpresso for CEBIP ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to symbiotic bacterium( GO:0009609 )
response to molecule of bacterial origin( GO:0002237 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
calcium-mediated signaling( GO:0019722 )
defense response to fungus( GO:0050832 )
lateral root development( GO:0048527 )
response to temperature stimulus( GO:0009266 )
response to chitin( GO:0010200 )
response to jasmonic acid stimulus( GO:0009753 )
response to bacterium( GO:0009617 )
defense response( GO:0006952 )
chitin binding( GO:0008061 )
integral to membrane( GO:0016021 )
cell wall macromolecule catabolic process( GO:0016998 )
response to molecule of fungal origin( GO:0002238 )
detection of molecule of fungal origin( GO:0032491 )
Trait Ontology disease resistance( TO:0000112 )
fungal disease resistance( TO:0000439 )
jasmonic acid sensitivity( TO:0000172 )
blast disease( TO:0000074 )
temperature response trait( TO:0000432 )
lateral root number( TO:0001013 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 19, 2024


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