Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol 18S rRNA
Gene Symbol Synonym rrn18
CGSNL Gene Name 18S RIBOSOMAL RNA
Gene Name Synonym 18S RIBOSOMAL RNA, 18S ribosomal RNA, 18S rRNA
Protein Name
Allele
Chromosome No. Mt
Explanation DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400 (cultivar Nipponbare), DQ167807 (isolate PA64S). D38480. BA000029 (Nipponbare complete mitochondrial genome). AB763988, AB763990.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
References
Toda T., Toriyama K.
Rice (N Y) 2013  6  2
Re-sequencing of mitochondrial genes in a standard rice cultivar Nipponbare.
Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010  26(2)  275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006  140(2)  401-410
The Rice Mitochondrial Genomes and Their Variations
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
Nakazono,M., Tsutsumi,N. and Hirai,A.
Plant Sci. 1995  105  227-234
The CRTA motif is present in the promoters of mitochondrial genes of rice
M Iwahashi, M Nakazono, A Kanno, K Sugino, T Ishibashi, A Hirai
Theor. Appl. Genet. 1992  84(3-4)  275-9
Genetic and physical maps and a clone bank of mitochondrial DNA from rice.
DB Reference
Gramene ID GR:0100180
Ontologies
Gene Ontology mitochondrial small ribosomal subunit( GO:0005763 )
peptide biosynthetic process( GO:0043043 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 27, 2015

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