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Basic Information
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CGSNL Gene Symbol
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CIF1
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Gene Symbol Synonym
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Cinf(t)*(Lcr), cinf(t), Cif, Lcr, Cinf
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CGSNL Gene Name
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CROSS-INCOMPATIBILITY IN THE FEMALE REACTION 1
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Gene Name Synonym
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Cross-incompatibility in the female reaction
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Protein Name
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Allele
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41.0
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Chromosome No.
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6
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Explanation
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Low crossabiity when this gene exists in a female parent. Reciprocal cross shows normal seed setting. Genetic symbol Lcr was changed to Cinf in Kobayashi & Sano, 1996. PO:0006318; floret (sensu Poaceae). GRO:0007044; 06-heading stage.
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Trait Class
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Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Yohei Koide, Mitsunobu Ikenaga, Yuhei Shinya, Kazuki Matsubara, Yoshio Sano
Euphytica 2008 164 753-760
Two loosely linked genes controlling the female specificity for cross-incompatibility in rice.
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Matsubara K, Khin-Thidar, Sano Y.
Genetics 2003 165(1) 343-52.
A gene block causing cross-incompatibility hidden in wild and cultivated rice.
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Kobayashi, S. and Y. Sano
Breeding Science 1997 47(Suppl. 2) 216
Developmental and genetical study of cross-incompatibility in rice.
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Sano, Y. and S. Kobayashi
Rice Genetics III. IRRI, Manila, Philippines. 1996 381-385.
Genetic dissection of crossability in rice.
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Sano, Y. and S. Kobayashi
Breeding Science 1996 46(Suppl. 1) 161
Cross-incompatibility based on genetic differentiation in both mega- and microspores in rice.
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Kobayashi, S. and Y. Sano
RGN 1996 13 119-121.
Three genes involved in the unidirectional cross-incompatibility system observed in a sativa-rufipogon hybrid.
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Kinoshita, T.
RGN 1994 11 8-11
I. Registration of new gene symbols.
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Sano, Y.
Japan. J. Breed. 1992 42 561-572.
Genetic comparisons of chromosome 6 between wild and cultivated rice.
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Sano, Y.
RGN 1991 8 115-116.
A gene for low crossability found in the common wild rice.
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DB Reference
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Gramene ID
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GR:0060139
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Ontologies
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Gene Ontology
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pollination( GO:0009856 )
fertilization( GO:0009566 )
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Trait Ontology
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incompatibility trait( TO:0000035 )
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Plant Ontology
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spikelet floret( PO:0009082 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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May 1, 2011
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Update info.