Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CHT1
Gene Symbol Synonym Cht1*(Chi1), Ch16, Cht1, CHT-1, CH16, RC24, OsChia1a, OsChia1, Chi1, Cht1*, Chi-1, Cht-1, Cht1, RCC1, OsCht-1
CGSNL Gene Name CHITINASE 1
Gene Name Synonym Chitinase1, Chitinase 1, Pathogenesis related (PR)-3 chitinase 1, Class I chitinase a, Chitinase-1(class I)
Protein Name CHITINASE 1
Allele
Chromosome No. 6
Explanation LOC_Os06g51060. EC=3.2.1.14 PR-3 chitinase, pathogenesis related 3 chitinase, POLY-BETA-GLUCOSAMINIDASE, CHITODEXTRINASE, "1,4-BETA- POLY-N-ACETYLGLUCOSAMINIDASE". Q42993. D16221. X87109. Z29961. D10423 (partial cds). X56063.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK061042
MSU ID LOC_Os06g51060.1
RAP ID Os06g0726200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Chen J., Hu L., Sun L., Lin B., Huang K., Zhuo K., Liao J.
Mol. Plant Pathol. 2018   
A novel Meloidogyne graminicola effector, MgMO237, interacts with multiple host defence-related proteins to manipulate plant basal immunity and promote parasitism.
Karmakar S., Molla K.A., Das K., Sarkar S.N., Datta S.K., Datta K.
Sci Rep 2017  7(1)  7900
Dual gene expression cassette is superior than single gene cassette for enhancing sheath blight tolerance in transgenic rice.
Wang C., Wang G., Zhang C., Zhu P., Dai H., Yu N., He Z., Xu L., Wang E.
Mol Plant 2017  10(4)  619-633
OsCERK1-Mediated Chitin Perception and Immune Signaling Requires Receptor-like Cytoplasmic Kinase 185 to Activate an MAPK Cascade in Rice.
Tang M., Ning Y., Shu X., Dong B., Zhang H., Wu D., Wang H., Wang G.L., Zhou B.
Rice (N Y) 2017  10(1)  5
The Nup98 Homolog APIP12 Targeted by the Effector AvrPiz-t is Involved in Rice Basal Resistance Against Magnaporthe oryzae.
Karmakar S., Molla K.A., Chanda P.K., Sarkar S.N., Datta S.K., Datta K.
Planta 2016  243(1)  115-130
Green tissue-specific co-expression of chitinase and oxalate oxidase 4 genes in rice for enhanced resistance against sheath blight.
You Q., Zhai K., Yang D., Yang W., Wu J., Liu J., Pan W., Wang J., Zhu X., Jian Y., Liu J., Zhang Y., Deng Y., Li Q., Lou Y., Xie Q., He Z.
Cell Host Microbe 2016  20(6)  758-769
An E3 Ubiquitin Ligase-BAG Protein Module Controls Plant Innate Immunity and Broad-Spectrum disease resistance.
Katsuragi Y., Takai R., Furukawa T., Hirai H., Morimoto T., Katayama T., Murakami T., Che F.S.
Mol. Plant Microbe Interact. 2015   
CD2-1, the C-terminal region of flagellin, modulates the induction of immune responses in rice.
Wu J.a d, Lee D.Y.b, Wang Y.a d, Kim S.T.c, Baek S.B.e, Kim S.G.e, Kang K.Y.a b
Physiol. Mol. Plant Pathol. 2014  88  28-35
Protein profiles secreted from phylloplane of rice leaves free from cytosolic proteins: Application to study rice-Magnaporthe Oryzae interactions
Molla K.A., Karmakar S., Chanda P.K., Ghosh S., Sarkar S.N., Datta S.K., Datta K.
Mol. Plant Pathol. 2013  14(9)  910-22
Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice.
Wu T., Tang D., Chen W., Huang H., Wang R., Chen Y.
Gene 2013  527(1)  235-42
Expression of antimicrobial peptides thanatin(S) in transgenic Arabidopsis enhanced resistance to phytopathogenic fungi and bacteria.
Shen X., Liu H., Yuan B., Li X., Xu C., Wang S.
Plant Cell Environ. 2011  34(2)  179-91
OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesis.
Kurusu T,Hamada J,Nokajima H,Kitagawa Y,Kiyoduka M,Takahashi A,Hanamata S,Ohno R,Hayashi T,Okada K,Koga J,Hirochika H,Yamane H,Kuchitsu K
Plant Physiol. 2010  153  678-92
Regulation of microbe-associated molecular pattern-induced hypersensitive cell death, phytoalexin production, and defense gene expression by calcineurin B-like protein-interacting protein kinases, OsCIPK14/15, in rice cultured cells.
Shen X,Yuan B,Liu H,Li X,Xu C,Wang S
Plant J. 2010  64(1)  86-99
Opposite functions of a rice mitogen-activated protein kinase in the process of resistance against Xanthomonas oryzae.
Xiao,W., Liu,H., Li,Y., Li,X., Xu,C., Long,M. and Wang,S.
PLoS One 2009  4 (2)  E4603
A rice gene of de novo origin negatively regulates pathogen-induced defense response
Takai R., Kaneda T., Isogai A., Takayama S., Fang-Sik Che
Biosci. Biotechnol. Biochem. 2007  71(2)  590-3
A new method of defense response analysis using a transient expression system in rice protoplasts.
Yuan,B., Shen,X., Li,X., Xu,C. and Wang,S.
Planta. 2007  226(4)  953-960
Mitogen-activated protein kinase OsMPK6 negatively regulates rice disease resistance to bacterial pathogens
Yasuda H, Hayashi Y, Jomori T, Takaiwa F.
Plant Cell Physiol. 2006  47(6)  756-63
The correlation between expression and localization of a foreign gene product in rice endosperm.
Yoshie Y, Goto K, Takai R, Iwano M, Takayama S, Isogai A, Che F.S.
Plant Biotechnology 2005  22(2)  127-135
Function of the rice gp91phox homologs OsrbohA and OsrbohE genes in ROS-dependent plant immune responses
Tanaka N., Fang-Sik Che, Watanabe N., Fujiwara S., Takayama S., Isogai A.
Mol. Plant Microbe Interact. 2003  16(5)  422-8
Flagellin from an incompatible strain of Acidovorax avenae mediates H2O2 generation accompanying hypersensitive cell death and expression of PAL, Cht-1, and PBZ1, but not of Lox in rice.
Xu,Y., Zhu,Q., Panbangred,W., Shirasu,K. and Lamb,C.
Plant Mol. Biol. 1996  30(3)  387-401
Regulation, expression and function of a new basic chitinase gene in rice (Oryza sativa L.).
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Kim,Y., Baek,J., Park,H., Choi,Y. and Kim,S.
Biosci. Biotechnol. Biochem. 1994  58(6)  1164-1166
Isolation and characterization of the cDNA clones encoding class I chitinase in suspension cultures of rice cell
Nishizawa,Y., Kishimoto,N., Saito,A. and Hibi,T.
Mol. Gen. Genet. 1993  241(1-2)  1-10
Sequence variation, differential expression and chromosomal location of rice chitinase genes.
Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A.
Plant J. 1992  2(6)  1005-1009
Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
Saito, A., M. Yano, N. Kishimoto, M. Nakagahra, A. Yoshimura, K. Saito, S. Kuhara, Y. Ukai, M. Kawase, T. Nagamine, S. Yoshimura, O. Ideta, R. Ohsawa, Y. Hayano, N. Iwata and M. Sugiura
Japan. J. Breed. 1991  41  665-670.
Linkage map of restriction fragment length polymorphism loci in rice.
Nishizawa,Y. and Hibi,T.
Plant Sci. 1991  76  211-218
Rice chitinase gene: cDNA cloning and stress-induced expression.
TextPresso Search Search textpresso for CHT1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060133
Ontologies
Gene Ontology chitinase activity( GO:0004568 )
chitin catabolic process( GO:0006032 )
chitin binding( GO:0008061 )
endochitinase activity( GO:0008843 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
cell wall macromolecule catabolic process( GO:0016998 )
defense response to fungus( GO:0050832 )
response to other organism( GO:0051707 )
response to ethylene stimulus( GO:0009723 )
salicylic acid mediated signaling pathway( GO:0009863 )
response to salicylic acid stimulus( GO:0009751 )
response to molecule of bacterial origin( GO:0002237 )
defense response to bacterium( GO:0042742 )
Trait Ontology bacterial disease resistance( TO:0000315 )
fungal disease resistance( TO:0000439 )
ethylene sensitivity( TO:0000173 )
plant growth hormone sensitivity( TO:0000401 )
blast disease( TO:0000074 )
sheath blight disease resistance( TO:0000255 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 24, 2018


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