Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GW8
Gene Symbol Synonym SPL16, OsSPL16, SLP1, qGW8
CGSNL Gene Name GRAIN-WIDTH 8
Gene Name Synonym Squamosa promoter-binding-like protein 16, SQUAMOSA promoter-binding-like 16, stunted lemma palea 1, grain-width 8
Protein Name RICE SQUAMOSA PROMOTER-BINDING-LIKE POTEIN 16
Allele slp1, gw8, GW8HJX74, gw8Basmati, GW8-A, GW8-B
Chromosome No. 8
Explanation Q6YZE8. an SBP-domain transcription factor.
Trait Class Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Other
Expression
Sequence/Locus
cDNA Accession No. AK109469
MSU ID LOC_Os08g41940.1
RAP ID Os08g0531600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018  9(6) 
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
Ngangkham U., Samantaray S., Yadav M.K., Kumar A., Chidambaranathan P., Katara J.L.
PLoS ONE 2018  13(1)  e0190684
Effect of multiple allelic combinations of genes on regulating grain size.in rice.
Yu H., Ruan B., Wang Z., Ren D., Zhang Y., Leng Y., Zeng D., Hu J., Zhang G., Zhu L., Gao Z., Chen G., Guo L., Chen W., Qian Q.
Front Plant Sci 2017  8  486
Fine Mapping of a Novel defective glume 1 (dg1) Mutant, Which Affects Vegetative and Spikelet Development in Rice.
Jiang S., Sun S., Bai L., Ding G., Wang T., Xia T., Jiang H., Zhang X., Zhang F.
PLoS ONE 2017  12(7)  e0181037
Resequencing and variation identification of whole genome of the japonica rice variety "Longdao24" with high yield.
Shi L., Wei X.J., Adedze Y.M., Sheng Z.H., Tang S.Q., Hu P.S., Wang J.L.
Genet. Mol. Res. 2016  15(3) 
Characterization and gene cloning of the rice (Oryza sativa L.) dwarf and narrow-leaf mutant DNL3.
Wang S., Li S., Liu Q., Wu K., Zhang J., Wang S., Wang Y., Chen X., Zhang Y., Gao C., Wang F., Huang H., Fu X.
Nat. Genet. 2015  47(8)  949-54
The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality.
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013  16(2)  213-20
Genes offering the potential for designing yield-related traits in rice.
Wang S., Wu K., Yuan Q., Liu X., Liu Z., Lin X., Zeng R., Zhu H., Dong G., Qian Q., Zhang G., Fu X.
Nat. Genet. 2012  44(8)  950-4
Control of grain size, shape and quality by OsSPL16 in rice.
Wang SS,Wang CS,Tseng TH,Hou YL,Chen KY
Theor. Appl. Genet. 2011  122(8)  1489-96
High-resolution genetic mapping and candidate gene identification of the SLP1 locus that controls glume development in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
TextPresso Search Search textpresso for GW8 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
zinc ion binding( GO:0008270 )
positive regulation of cell proliferation( GO:0008284 )
regulation of transcription( GO:0045449 )
Trait Ontology grain size( TO:0000397 )
grain width( TO:0000402 )
seed quality( TO:0000162 )
grain shape( TO:0002730 )
seed maturation( TO:0002661 )
grain yield( TO:0000396 )
grain length( TO:0000734 )
grain length to width ratio( TO:0002731 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 27, 2019


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