Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol SPL12
Gene Symbol Synonym OsSPL12, DLN176, OsDLN176
CGSNL Gene Name RICE SQUAMOSA PROMOTER-BINDING-LIKE 12
Gene Name Synonym Squamosa promoter-binding-like protein 12, SQUAMOSA Promoter-Binding Protein-Like 12a, DLN repressor 176, DLN motif protein 176
Protein Name RICE SQUAMOSA PROMOTER-BINDING-LIKE POTEIN 12
Allele
Chromosome No. 6
Explanation A2YGR5. GO:2000280: regulation of root development. OsmiR156 target gene.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK061641
AK073179
AK102136
MSU ID LOC_Os06g49010.1
LOC_Os06g49010.2
LOC_Os06g49010.3
LOC_Os06g49010.4
LOC_Os06g49010.5
LOC_Os06g49010.6
RAP ID Os06g0703500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Desai J.S., Lawas L.M.F., Valente A.M., Leman A.R., Grinevich D.O., Jagadish S.V.K., Doherty C.J.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(25) 
Warm nights disrupt transcriptome rhythms in field-grown rice panicles.
Zhu J., Li Y., Lin J., Wu Y., Guo H., Shao Y., Wang F., Wang X., Mo X., Zheng S., Yu H., Mao C.
Plant J. 2019   
crd1, an Xpo1 domain protein, regulates miRNA accumulation and crown root development in rice.
Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019  31(6)  1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019  20(7) 
Analysis of Rice Proteins with DLN repressor Motif/S.
Liu Q., Shen G., Peng K., Huang Z., Tong J., Kabir M.H., Wang J., Zhang J., Qin G., Xiao L.
J Integr Plant Biol 2015   
A T-DNA insertion mutant Osmtd1 was altered in architecture by upregulating MicroRNA156f in rice.
Xie K., Shen J., Hou X., Yao J., Li X., Xiao J., Xiong L.
Plant Physiol. 2012  158(3)  1382-94
Gradual increase of miR156 regulates temporal expression changes of numerous genes during leaf development in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
TextPresso Search Search textpresso for SPL12 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology zinc ion binding( GO:0008270 )
response to temperature stimulus( GO:0009266 )
temperature compensation of the circadian clock( GO:0010378 )
circadian rhythm( GO:0007623 )
regulation of transcription( GO:0045449 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
root development( GO:0048364 )
Trait Ontology root development trait( TO:0000656 )
temperature response trait( TO:0000432 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
-
Phenotype images
-
Last updated
Mar 17, 2022


/rice/oryzabase