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Basic Information
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CGSNL Gene Symbol
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LG1
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Gene Symbol Synonym
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SPL8, OsSPL8, OsLG1, GLR2, OsGLR2
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CGSNL Gene Name
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LIGULELESS 1
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Gene Name Synonym
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Squamosa promoter-binding-like protein 8, Protein LIGULELESS 1, OsLIGULELESS1, glufosinate-resistant rice 2
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Protein Name
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RICE SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8
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Allele
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lg1, oslg1, oslg1-1, oslg1-2, glr2, glr2-c1, glr2-c2, glr2/spl8-c1, glr2/spl8-c2
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Chromosome No.
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4
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Explanation
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Q01KM7(indica), Q7XPY1(japonica). AB776991(O. sativa), AB776992(O. rufipogon W630). TO:0000847: panicle anatomy and morphology trait. GO:0098869: cellular oxidant detoxification. GO:0098771: inorganic ion homeostasis. TO:1000036: root system potassium content. TO:1000041: root system sodium content.
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Trait Class
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Vegetative organ - Leaf
Reproductive organ - Inflorescence
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK068104
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MSU ID
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LOC_Os04g56170.1
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RAP ID
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Os04g0656500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cheng W., Ren Y., Wang J., Chen C., Fang C., Peng L., Zhang D., Tao L., Zhan Y., Wu K., Wu Y., Liu B., Fu X., Ye Y.
Plant Physiol. 2024 197(1)
Mutation of GLR2 confers enhanced glufosinate resistance and salt tolerance in rice.
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Jiang X., Hong W.J., Lee S.K., Jung K.H.
Plants (Basel) 2023 12(16)
Genome-Wide Identification and Analysis of Collar Region-Preferential Genes in Rice.
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Yang C., Ma Y., He Y., Tian Z., Li J.
Plant J. 2018 93(3) 489-501
OsOFP19 modulates plant architecture by integrating the cell division pattern and brassinosteroid signaling.
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Li L.F., Li Y.L., Jia Y., Caicedo A.L., Olsen K.M.
Nat. Genet. 2017 49(5) 811-814
Signatures of adaptation in the weedy rice genome.
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Zhu Z., Tan L., Fu Y., Liu F., Cai H., Xie D., Wu F., Wu J., Matsumoto T., Sun C.
Nat Commun 2013 4 2200
Genetic control of inflorescence architecture during rice domestication.
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Ishii T., Numaguchi K., Miura K., Yoshida K., Thanh P.T., Htun T.M., Yamasaki M., Komeda N., Matsumoto T., Terauchi R., Ishikawa R., Ashikari M.
Nat. Genet. 2013 45(4) 462-5, 465e1-2
OsLG1 regulates a closed panicle trait in domesticated rice.
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Lee J,Park JJ,Kim SL,Yim J,An G
Plant Mol. Biol. 2007 65 487-99
Mutations in the rice liguleless gene result in a complete loss of the auricle, ligule, and laminar joint.
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Xie K, Wu C, Xiong L.
Plant Physiol. 2006 142(1) 280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cellular detoxification of nitrogen compound( GO:0070458 )
potassium ion homeostasis( GO:0055075 )
sodium ion homeostasis( GO:0055078 )
response to salt stress( GO:0009651 )
response to herbicide( GO:0009635 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription( GO:0045449 )
zinc ion binding( GO:0008270 )
DNA binding( GO:0003677 )
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Trait Ontology
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leaf angle( TO:0000206 )
leaf development trait( TO:0000655 )
salt tolerance( TO:0006001 )
herbicide sensitivity( TO:0000058 )
hydrogen peroxide content( TO:0000605 )
relative chlorophyll content( TO:0001016 )
relative plant height( TO:0001034 )
relative root length( TO:0000516 )
relative total dry weight( TO:0000633 )
sodium content( TO:0000608 )
potassium content( TO:0000609 )
shoot potassium content( TO:0020003 )
shoot sodium content( TO:0020004 )
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Plant Ontology
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leaf collar( PO:0006012 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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May 21, 2025
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Update info.