Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SPL7
Gene Symbol Synonym OsSPL7
CGSNL Gene Name RICE SQUAMOSA PROMOTER-BINDING-LIKE 7
Gene Name Synonym Squamosa promoter-binding-like protein 7
Protein Name RICE SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7
Allele spl7, spl7-1, Osspl7, osspl7, osspl7-1, osspl7-2
Chromosome No. 4
Explanation Q01JD1(indica), Q7XT42(japonica). OsSPL7 is a target of miR156f. TO: inflorescence axis length. TO:0001061: inflorescence axis thickness. TO:0001063: panicle inflorescence internode length. TO:0001062: number of panicle internodes. TO:0001069: cooking quality trait.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Seed - Physiological traits - Storage substances
Tolerance and resistance - Disease resistance
Character as QTL - Grain quality
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Other
Expression
Sequence/Locus
cDNA Accession No. AK068749
MSU ID LOC_Os04g46580.1
RAP ID Os04g0551500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Huang K., Lu F., Chen P., Jiao G., Lin H., Zhang J., Zhao S., Cao R., Shao G., Sheng Z., Hu S., Tang S., Hu P., Wei X.
Plant Biotechnol. J. 2025  23(7)  2583-2594
A large-scale gene regulatory network for rice endosperm starch biosynthesis and its application in genetic improvement of rice quality.
Yang B., Sun Y., Minne M., Ge Y., Yue Q., Goossens V., Mor E., Callebaut B., Bevernaege K., Winne J.M., Audenaert D., De Rybel B.
Science 2024  386(6723)  eado4298
SPL13 controls a root apical meristem phase change by triggering oriented cell divisions.
Zhang L.L., Huang Y.Y., Zheng Y.P., Liu X.X., Zhou S.X., Yang X.M., Liu S.L., Li Y., Li J.L., Zhao S.L., Wang H., Ji Y.P., Zhang J.W., Pu M., Zhao Z.X., Fan J., Wang W.M.
Plant J. 2022  110(1)  166-178
Osa-miR535 targets SQUAMOSA promoter binding protein-like 4 to regulate blast disease resistance in rice.
Liu M., Shi Z., Zhang X., Wang M., Zhang L., Zheng K., Liu J., Hu X., Di C., Qian Q., He Z., Yang D.L.
Nat Plants 2019  5(4)  389-400
Inducible overexpression of Ideal Plant Architecture1 improves both yield and disease resistance in rice.
Yang X., Wang J., Dai Z., Zhao X., Miao X., Shi Z.
Rice (N Y) 2019  12(1)  40
miR156f integrates panicle architecture through genetic modulation of branch number and pedicel length pathways.
Dai Z., Wang J., Yang X., Lu H., Miao X., Shi Z.
J. Exp. Bot. 2018  69(21)  5117-5130
Modulation of plant architecture by the miR156f-OsSPL7-OsGH3.8 pathway in rice.
Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(50)  15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription( GO:0045449 )
zinc ion binding( GO:0008270 )
gibberellic acid mediated signaling( GO:0009740 )
defense response to bacterium( GO:0042742 )
inflorescence development( GO:0010229 )
regulation of timing of meristematic phase transition( GO:0048506 )
Trait Ontology inflorescence branching( TO:0000050 )
tillering ability( TO:0000329 )
tiller number( TO:0000346 )
plant height( TO:0000207 )
bacterial blight disease resistance( TO:0000175 )
gibberellic acid sensitivity( TO:0000166 )
yield trait( TO:0000371 )
leaf size( TO:0002637 )
inflorescence development trait( TO:0000621 )
seed quality( TO:0000162 )
amylose content( TO:0000196 )
alkali digestion( TO:0000134 )
Plant Ontology leaf( PO:0025034 )
bract primordium( PO:0025487 )
inflorescence development stage( PO:0001083 )
endosperm development stage( PO:0007633 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Sep 12, 2025


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