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Basic Information
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CGSNL Gene Symbol
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AMY2A
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Gene Symbol Synonym
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Amy2A*(RAmy2A), AMY1.5, AMYC2, RAmy2A, Amy4, Amy2A
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CGSNL Gene Name
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ALPHA-AMYLASE 2A
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Gene Name Synonym
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Alpha-amylase2A, Alpha-amylase isozyme 2A, Alpha-amylase isozyme C2, Alpha-amylase-2A, Amylase-4
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Protein Name
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ALPHA-AMYLASE 2A
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Allele
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Chromosome No.
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6
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Explanation
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EC=3.2.1.1 1,4-alpha-D-glucan glucanohydrolase. Q0D9J1(japonica), A2YGY2(indica). BGIOSGA023598 (indica). TO:0000949: seedling growth and development trait. GO:0090351: seedling development.
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Trait Class
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Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Character as QTL - Germination
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK059671
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MSU ID
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LOC_Os06g49970.2
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RAP ID
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Os06g0713800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Tang X., Zhong W., Wang K., Gong X., Xia Y., Nong J., Xiao L., Xia S.
Int J Mol Sci 2023 24(16)
Regulation of Grain Chalkiness and Starch Metabolism by FLO2 interaction factor 3, a bHLH transcription factor in <i>Oryza sativa</i>.
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Wang Y., Wang Y., Yang R., Wang F., Fu J., Yang W., Bai T., Wang S., Yin H.
J Zhejiang Univ Sci B 2021 22(12) 1002-1021
Effects of gibberellin priming on seedling emergence and transcripts involved in mesocotyl elongation in rice under deep direct-seeding conditions.
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Wang G., Li X., Li Y., Ye N., Li H., Zhang J.
J. Exp. Bot. 2021 72(4) 1384-1398
Comprehensive epigenome and transcriptome analysis of carbon reserve remobilization in indica and japonica rice stems under moderate soil drying.
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Wada H., Masumoto-Kubo C., Tsutsumi K., Nonami H., Tanaka F., Okada H., Erra-Balsells R., Hiraoka K., Nakashima T., Hakata M., Morita S.
PLoS ONE 2017 12(7) e0181272
Turgor-responsive starch phosphorylation in Oryza sativa stems: A primary event of starch degradation associated with grain-filling ability.
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Hwang YS, Thomas BR, Rodriguez RL.
Plant Mol. Biol. 1999 40(6) 911-920
Differential expression of rice alpha-amylase genes during seedling development under anoxia.
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Sheu JJ, Yu TS, Tong WF, Yu SM.
J. Biol. Chem. 1996 271(43) 26998-7004
Carbohydrate starvation stimulates differential expression of rice alpha-amylase genes that is modulated through complicated transcriptional and posttranscriptional processes.
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Parco, A., G. Magpantay, G. Second, R. Rodriguez and N. Huang
RGN 1994 11 137-140.
Restriction fragment length polymorphism and linkage analysis of rice alpha-amylase gene family.
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Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
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Rodriguez, R.L., N. Huang, T. Sutliff, S. Ranjhan, E. Karrer and J. Litts
Rice Genetics. II. IRRI, Manila, Philippines. 1991 417-429.
Organization, structure and expression of the alpha-amylase multigene family.
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Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991 82 481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
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Huang,N., Sutliff,T.D., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1990 14(5) 655-668
Classification and characterization of the rice alpha-amylase multigene family.
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DB Reference
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Gramene ID
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GR:0060045
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Ontologies
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Gene Ontology
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response to water deprivation( GO:0009414 )
response to gibberellin stimulus( GO:0009739 )
internode patterning( GO:0080006 )
alpha-amylase activity( GO:0004556 )
calcium ion binding( GO:0005509 )
carbohydrate metabolic process( GO:0005975 )
starch catabolic process( GO:0005983 )
sucrose catabolic process( GO:0005987 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
secretion by cell( GO:0032940 )
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Trait Ontology
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mesocotyl length( TO:0000544 )
gibberellic acid sensitivity( TO:0000166 )
drought tolerance( TO:0000276 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Nov 28, 2023
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