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Basic Information
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CGSNL Gene Symbol
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AMY3A
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Gene Symbol Synonym
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Amy3A/B/C*(RAmy3A/B/C), Amy3A, RAmy3A/B/C, Amy3A/B/C*, AMY1.2, Amy5, RAmy3A, OsEnS-129
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CGSNL Gene Name
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ALPHA-AMYLASE 3A
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Gene Name Synonym
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Alpha-amylase3A, Alpha-amylase isozyme 3A precursor, Alpha-amylase isozyme 3A, Alpha-amylase-3A, Amylase-5, endosperm-specific gene 129
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Protein Name
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ALPHA-AMYLASE 3A
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Allele
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Chromosome No.
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9
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Explanation
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EC=3.2.1.1 1,4-alpha-D-glucan glucanohydrolase. P27932. X56336.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
Character as QTL - Grain quality
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK063988
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MSU ID
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LOC_Os09g28400.1
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RAP ID
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Os09g0457400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Sera Y., Hanamata S., Sakamoto S., Ono S., Kaneko K., Mitsui Y., Koyano T., Fujita N., Sasou A., Masumura T., Saji H., Nonomura K.I., Mitsuda N., Mitsui T., Kurusu T., Kuchitsu K.
Sci Rep 2019 9(1) 18544
Essential roles of autophagy in metabolic regulation in endosperm development during rice seed maturation.
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Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013 530(2) 236-47
Genome-wide analysis of endosperm-specific genes in rice.
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Hakata M., Kuroda M., Miyashita T., Yamaguchi T., Kojima M., Sakakibara H., Mitsui T., Yamakawa H.
Plant Biotechnol. J. 2012 10(9) 1110-7
Suppression of alpha-amylase genes improves quality of rice grain ripened under high temperature.
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Hwang YS, Thomas BR, Rodriguez RL.
Plant Mol. Biol. 1999 40(6) 911-920
Differential expression of rice alpha-amylase genes during seedling development under anoxia.
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Sheu JJ, Yu TS, Tong WF, Yu SM.
J. Biol. Chem. 1996 271(43) 26998-7004
Carbohydrate starvation stimulates differential expression of rice alpha-amylase genes that is modulated through complicated transcriptional and posttranscriptional processes.
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Parco, A., G. Magpantay, G. Second, R. Rodriguez and N. Huang
RGN 1994 11 137-140.
Restriction fragment length polymorphism and linkage analysis of rice alpha-amylase gene family.
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Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
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Sutliff,T.D., Huang,N., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1991 16(4) 579-591
Characterization of an alpha-amylase multigene cluster in rice.
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Rodriguez, R.L., N. Huang, T. Sutliff, S. Ranjhan, E. Karrer and J. Litts
Rice Genetics. II. IRRI, Manila, Philippines. 1991 417-429.
Organization, structure and expression of the alpha-amylase multigene family.
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Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991 82 481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
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Huang,N., Sutliff,T.D., Litts,J.C. and Rodriguez,R.L.
Plant Mol. Biol. 1990 14(5) 655-668
Classification and characterization of the rice alpha-amylase multigene family.
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DB Reference
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Gramene ID
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GR:0060046
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Ontologies
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Gene Ontology
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response to abscisic acid stimulus( GO:0009737 )
response to heat( GO:0009408 )
alpha-amylase activity( GO:0004556 )
calcium ion binding( GO:0005509 )
carbohydrate metabolic process( GO:0005975 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
starch catabolic process( GO:0005983 )
sucrose catabolic process( GO:0005987 )
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Trait Ontology
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heat tolerance( TO:0000259 )
abscisic acid sensitivity( TO:0000615 )
chalky endosperm( TO:0000266 )
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Plant Ontology
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seed( PO:0009010 )
seed development stage( PO:0001170 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Dec 9, 2025
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Update info.