遺伝子 - 詳細

検索リストダウンロード trait classification

詳細 - 遺伝子

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Basic Information

CGSNL 遺伝子シンボル

NL1

遺伝子シンボルシノニム

nl1, OsGATA15, GATA15, OsNL1

CGSNL 遺伝子名

NECK LEAF 1

遺伝子名シノニム

穂首苞葉１

タンパク質名

GATA TYPE TRANSCRIPTION FACTOR

対立遺伝子

nl1-1, nl1-2, nl1-3, nl1, nl1-5, nl1-6

染色体番号

解説

穂首ほう葉は穂の基部の節から出る苞（ほう）で、野生型は包まれない（苞葉退化）のに対し、NL1変異体では苞葉に包まれる。これが穂より長いときには、穂が成熟しても葉鞘から小穂が現れない。PO:0009049; inflorescence. GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007046; 07-milk stage. DQ784546. C2C2-GATA (GATA C2C2 zinc finger transcription factor). a paralog of Arabidopsis HAN.

形質クラス

生殖器官 - 花序
生殖器官 - 穂

発現

Sequence/Locus

cDNA Accession No.

AK073464
AK101287

MSU ID

LOC_Os05g50270.1

RAP ID

Os05g0578900

Links

Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )

INSD Accession List
(Test version)

マップ

位置情報(cM)

110.0

リンケージマップ

Classical linkage map

文献

Xu T., Fu D., Xiong X., Zhu J., Feng Z., Liu X., Wu C.
PLoS Genet. 2023 19(4) e1010698

OsbHLH067, OsbHLH068, and OsbHLH069 redundantly regulate inflorescence axillary meristem formation in rice.

Wang L., Ming L., Liao K., Xia C., Sun S., Chang Y., Wang H., Fu D., Xu C., Wang Z., Li X., Xie W., Ouyang Y., Zhang Q., Li X., Zhang Q., Xiao J., Zhang Q.
Mol Plant 2021 14(7) 1168-1184

Bract suppression regulated by the miR156/529-SPLs-NL1-PLA1 module is required for the transition from vegetative to reproductive branching in rice.

Gupta P., Nutan K.K., Singla-Pareek SL., Pareek A.
Front Plant Sci 2017 8 1944

Abiotic Stresses Cause Differential Regulation of Alternative Splice Forms of GATA Transcription Factor in Rice.

Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44

Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.

Behringer C., Schwechheimer C.
Front Plant Sci 2015 6 90

B-GATA transcription factors - insights into their structure, regulation, and role in plant development.

Wang L,Yin H,Qian Q,Yang J,Huang C,Hu X,Luo D
Cell Res 2009 19 598-611

NECK LEAF 1, a GATA type transcription factor, modulates organogenesis by regulating the expression of multiple regulatory genes during reproductive development in rice.

José C Reyes, M Isabel Muro-Pastor, Francisco J Florencio
Plant Physiol. 2004 134(4) 1718-32

The GATA family of transcription factors in Arabidopsis and rice.

Kishimoto, N., E. Shimosaka, S. Matsuura and A. Saito
RGN 1992 9 118-124.

A current RFLP linkage map of rice Alignment of the molecular map with the classical map.

Yoshimura, A., O. Ideta, S. Takebayashi, T. Matsumoto, S. Yoshimura, T. Ogawa and N. Iwata
Japan. J. Breed. 1992 42(Suppl. 2) 124-125.

Integration of RFLP and conventional maps in rice. II. The location of gl-1 and xa-5.

Yano, M., A. Saito, A. Yoshimura, S. Kuhara, S. Yoshimura, O. Ikeda, N. Kishimoto, K. Saito, R. Ohsawa, K. Kawase, T. Nagamine, T. Ogawa, M. Nakagahra and N. Iwata
Japan. J. Breed. 1990 40(Suppl. 1) 468-469.

Chromosome identification of rice RFLP linkage groups.

Satoh, H. and N. Iwata
Japan. J. Breed. 1990 40(Suppl. 2) 268-269.

Linkage analysis in rice. On three mutant loci for endosperm properties, ge(giant embryo), du-4(dull endosperm-4) and flo-1(floury endosperm-1).

Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984 187-274.

Gene analysis and linkage map.

Iwata, N., H. Satoh and T. Omura
J. Fac. Agr. Kyushu Univ. 1984 29(2.3) 139-144.

Studies on the trisomics in rice plants (Oryza sativa L.). VII. On some marker genes located on chromosome 2 and their sequence on the linkage map.

Yoshimura, A., N. Iwata and T. Omura
Japan. J. Breed. 1982 32(4) 323-332.

Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L.). III. Marker genes located on chromosomes 2, 3, 4 and 7.

Sato, S., K. Muraoka and Y. Sano
Japan. J. Breed. 1982 32(3) 232-238.

Reconstruction of a linkage group corresponding to the Nishimura's second chromosome in rice, Oryza sativa L.

Iwata, N., H. Satoh and T. Omura
Japan. J. Breed. 1981 31(Suppl. 1) 66-67.

Linkage analysis by use of trisomics in rice (Oryza sativa L. ). IV. Linkage groups locating on chromosomes 2 and 10.

Iwata, N., H. Satoh and T. Omura
Japan. J. Breed. 1977 27(Suppl. 1) 250-251.

Linkage studies in rice.Linkage groups for 6 genes newly described.

Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963 53(1) 72-130.

Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).

Nagao, S.
Adv. Genet. 1951 4 181-212.

Genic analysis and linkage relationship of characters in rice.

TextPresso Search

Search textpresso for NL1 ( Recent references may be retrievable, but without any warranty )

DB Reference

Gramene ID

GR:0060573

オントロジー

Gene Ontology

bract development( GO:0010432 )
vegetative to reproductive phase transition( GO:0010228 )
inflorescence development( GO:0010229 )
cell differentiation( GO:0030154 )

Trait Ontology

panicle type( TO:0000089 )
inflorescence development trait( TO:0000621 )
inflorescence branching( TO:0000050 )
primary branch number( TO:0000547 )
secondary branch number( TO:0000557 )
spikelet number( TO:0000456 )

Plant Ontology

inflorescence( PO:0009049 )
bract( PO:0009055 )
bract primordium( PO:0025487 )
inflorescence development stage( PO:0001083 )

Rice Database Oryzabase

遺伝子 - 詳細

詳細 - 遺伝子