Update info.Gene - Detail
Detail of Gene
| Basic Information | |||
|---|---|---|---|
| CGSNL Gene Symbol | BGL | ||
| Gene Symbol Synonym | bgl, OsRopGEF10, Os RopGEF10, RopGEF10, OsGEF21, GEF21, SPD25, OsSPD25 | ||
| CGSNL Gene Name | BRIGHT GREEN LEAF | ||
| Gene Name Synonym | bright green leaf, guanine nucleotide exchange factor for Rop 10, GEF for ROP 10, Rop-specific GEF10, Rop-specific guanine nucleotide exchange factor 10, Guanine nucleotide exchange factor 21, small papilla deficient 25 | ||
| Protein Name | ROP-SPECIFIC GUANINE NUCLEOTIDE EXCHANGE FACTOR 10 | ||
| Allele | spd25, gef10-W260S | ||
| Chromosome No. | 5 | ||
| Explanation | RhoGEF family. PRONE domain containing protein. GRO:0007047; 02-seedling. TO:0001048: silicon content trait. GO:1902184: negative regulation of shoot apical meristem development. | ||
| Trait Class |
Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Leaf Vegetative organ - Culm Reproductive organ - panicle Coloration - Chlorophyll Seed - Morphological traits - Grain shape Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity |
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| Expression | |||
| Sequence/Locus | |||
| cDNA Accession No. |
AK101945
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| MSU ID |
LOC_Os05g38000.1
LOC_Os05g38000.2 |
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| RAP ID |
Os05g0454200 |
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| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |||
| Locate(cM) | 82.0 | ||
| Link map | Classical linkage map | ||
| References | |||
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Li M., Feng L., Ye H., Li M., Jin J., Tao L.Z., Liu H.
Rice (N Y) 2024 17(1) 57 OsRopGEF10 Attenuates Cytokinin Signaling to Regulate Panicle Development and grain yield in Rice.
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Munsif Ali Shad, Wang Y., Zhang H., Zhai S., Shalmani A., Li Y.
The Crop Journal 2023 11 345-360 Genetic analysis of GEFs and GDIs in rice reveals the roles of OsGEF5, OsGDI1, and OsGEF3 in the regulation of grain size and plant height
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Yoo J.H., Park J.H., Cho S.H., Yoo S.C., Li J., Zhang H., Kim K.S., Koh H.J., Paek N.C.
Plant Mol. Biol. 2011 77(6) 631-41 The rice bright green leaf (bgl) locus encodes OsRopGEF10, which activates the development of small cuticular papillae on leaf surfaces.
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Gu Y., Li S., Elizabeth M Lord, Yang Z.
Plant Cell 2006 18(2) 366-81 Members of a novel class of Arabidopsis Rho guanine nucleotide exchange factors control Rho GTPase-dependent polar growth.
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Satoh, H. and N. Iwata
Japan. J. Breed. 1990 40(Suppl. 2) 268-269. Linkage analysis in rice. On three mutant loci for endosperm properties, ge(giant embryo), du-4(dull endosperm-4) and flo-1(floury endosperm-1).
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Iwata, N. and T. Omura
Jpn. J. Genet. 1984 59(3) 199-204. Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.
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Iwata, N., H. Satoh and T. Omura
J. Fac. Agr. Kyushu Univ. 1984 29(2.3) 139-144. Studies on the trisomics in rice plants (Oryza sativa L.). VII. On some marker genes located on chromosome 2 and their sequence on the linkage map.
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Iwata, N., H. Satoh and T. Omura
Japan. J. Breed. 1981 31(Suppl. 1) 66-67. Linkage analysis by use of trisomics in rice (Oryza sativa L. ). IV. Linkage groups locating on chromosomes 2 and 10.
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| DB Reference | |||
| Gramene ID | GR:0060078 | ||
| Ontologies | |||
| Gene Ontology |
shoot development( GO:0048367 )
response to cytokinin stimulus( GO:0009735 ) plasma membrane( GO:0005886 ) inflorescence development( GO:0010229 ) negative regulation of cytokinin mediated signaling( GO:0080037 ) carbon utilization by fixation of carbon dioxide( GO:0015977 ) regulation of stomatal movement( GO:0010119 ) regulation of photosynthesis( GO:0010109 ) water homeostasis( GO:0030104 ) Rho guanyl-nucleotide exchange factor activity( GO:0005089 ) chloroplast organization( GO:0009658 ) chlorophyll metabolic process( GO:0015994 ) |
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| Trait Ontology |
leaf lamina color( TO:0000299 )
chlorophyll content( TO:0000495 ) water use efficiency( TO:0001017 ) relative water content( TO:0000136 ) photosynthetic rate( TO:0001015 ) stomatal conductance( TO:0000522 ) seed set percent( TO:0000455 ) 1000-seed weight( TO:0000382 ) grain yield( TO:0000396 ) starch grain synthesis( TO:0002658 ) starch content( TO:0000696 ) leaf temperature( TO:0000504 ) leaf gloss( TO:0000709 ) transpiration rate( TO:0001018 ) photosynthetic ability( TO:0000316 ) inflorescence development trait( TO:0000621 ) shoot apical meristem development( TO:0006020 ) grain number( TO:0002759 ) grain size( TO:0000397 ) cytokinin sensitivity( TO:0000167 ) primary branch number( TO:0000547 ) spikelet number( TO:0000456 ) grain length( TO:0000734 ) plant height( TO:0000207 ) panicle size( TO:0006032 ) grain yield per plant( TO:0000449 ) filled grain number( TO:0000447 ) shoot development trait( TO:0000654 ) |
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| Plant Ontology |
shoot system development stage( PO:0025527 )
carpel( PO:0009030 ) glume( PO:0009039 ) floral organ( PO:0025395 ) spikelet( PO:0009051 ) floral organ primordium( PO:0025477 ) plant embryo( PO:0009009 ) inflorescence meristem( PO:0000230 ) shoot apical meristem( PO:0020148 ) shoot system( PO:0009006 ) inflorescence development stage( PO:0001083 ) vascular leaf( PO:0009025 ) |
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| Related Strains | |||
| Stocks for Genes | 1 | ||
| F Lines | 11 | ||
| Backcross Fn Generation (T65) | 1 | ||
| Phenotype images | |||
Click to full size image in new window
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| Last updated | |||
| Dec 5, 2024 | |||
