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Basic Information
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CGSNL Gene Symbol
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COLD11
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Gene Symbol Synonym
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OsRAD51A1, RAD51A1, OsCOLD11
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CGSNL Gene Name
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CHILLING TOLERANCE DIVERGENCE 11
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Gene Name Synonym
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DNA repair protein RAD51A1
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Protein Name
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DNA REPAIR PROTEIN RAD51A
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Allele
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rad51a1, Osrad51a1, Osrad51a2, Osrad51-1, Osrad51-2, cold11-1, cold11-2, cold11-3, cold11-4
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Chromosome No.
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11
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Explanation
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AB08262, AB08261. the major gene underlying qCTS11-1. GO:1904975: response to bleomycin. GO:0035825: homologous recombination. PO:0030123: panicle inflorescence.
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Trait Class
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Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AB080262
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MSU ID
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LOC_Os11g40150.1
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RAP ID
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Os11g0615800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Li Z., Wang B., Luo W., Xu Y., Wang J., Xue Z., Niu Y., Cheng Z., Ge S., Zhang W., Zhang J., Li Q., Chong K.
Sci Adv 2023 9(1) eabq5506
Natural variation of codon repeats in <i>COLD11</i> endows rice with chilling resilience.
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Liu X., Cao Y., Du G., Zhang C., Xu M., Cheng Z., Shen Y., Yu H.
Int J Mol Sci 2022 23(17)
OsRAD51 Plays a Vital Role in Promoting Homologous Recombination in Rice Meiosis.
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Fu R., Wang C., Shen H., Zhang J., Higgins J.D., Liang W.
Front Plant Sci 2020 11 600820
Rice OsBRCA2 Is Required for DNA Double-Strand Break Repair in Meiotic Cells.
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Shim J.S., Oh N., Chung P.J., Kim Y.S., Choi Y.D., Kim J.K.
Front Plant Sci 2018 9 310
Overexpression of <i>OsNAC14</i> Improves drought tolerance in Rice.
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Xu Z., Zhang J., Xu M., Ji W., Yu M., Tao Y., Gong Z., Gu M., Yu H.
Plant J. 2018 95(2) 282-295
Rice rad51 paralogs play essential roles in somatic homologous recombination for DNA repair.
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Zhang P., Zhang Y., Sun L., Sinumporn S., Yang Z., Sun B., Xuan D., Li Z., Yu P., Wu W., Wang K., Cao L., Cheng S.
Front Plant Sci 2017 8 1639
The Rice AAA-ATPase OsFIGNL1 Is Essential for Male Meiosis.
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Morozumi Y., Ino R., Ikawa S., Mimida N., Shimizu T., Toki S., Ichikawa H., Shibata T., Kurumizaka H.
PLoS ONE 2013 8(10) e75451
Homologous Pairing Activities of Two Rice RAD51 Proteins, RAD51A1 and RAD51A2.
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Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010 154(4) 1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
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Rajanikant,C., Melzer,M., Rao,B.J. and Sainis,J.K.
Plant Mol. Biol. 2008 68(4-5) 479-491
Homologous recombination properties of OsRad51, a recombinase from rice
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TextPresso Search
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Search textpresso for COLD11
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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double-strand break repair( GO:0006302 )
nucleus( GO:0005634 )
response to cold( GO:0009409 )
synapsis( GO:0007129 )
pollen development( GO:0009555 )
synaptonemal complex assembly( GO:0007130 )
reciprocal meiotic recombination( GO:0007131 )
meiotic cell cycle( GO:0051321 )
damaged DNA binding( GO:0003684 )
ATP binding( GO:0005524 )
DNA-dependent ATPase activity( GO:0008094 )
DNA repair( GO:0006281 )
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Trait Ontology
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male sterility( TO:0000437 )
cold tolerance( TO:0000303 )
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Plant Ontology
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inflorescence( PO:0009049 )
pollen development stage( PO:0001007 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Jun 13, 2023
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