Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIN1C
Gene Symbol Synonym PIN1B, OsPIN1B, OsPIN1b, OsPIN1c
CGSNL Gene Name PIN PROTEIN 1C
Gene Name Synonym PIN PROTEIN 1B
Protein Name PIN PROTEIN 1C
Allele
Chromosome No. 11
Explanation BR000828. gi:32988390. OsPIN1b in Zou et al. 2014, Chen et al. 2020. GO:0060918: auxin transport.
Trait Class Biochemical character
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK103181
MSU ID LOC_Os11g04190.1
RAP ID Os11g0137000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Song M., Fan X., Chen J., Qu H., Luo L., Xu G.
Plant Physiol. 2020   
OsNAR2.1 interaction with OsNIT1 and OsNIT2 functions in root-growth responses to nitrate and ammonium.
Chen R., Xu N., Yu B., Wu Q., Li X., Wang G., Huang J.
Plant Sci. 2020  298  110575
The WUSCHEL-related homeobox transcription factor OsWOX4 controls the primary root elongation by activating OsAUX1 in rice.
Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020  101(6)  1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
Naz M., Luo B., Guo X., Li B., Chen J., Fan X.
Genes (Basel) 2019  10(4) 
Overexpression of Nitrate Transporter <i>OsNRT2.1</i> Enhances Nitrate-Dependent Root Elongation.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017  68(17)  4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
Yang J., Yuan Z., Meng Q., Huang G., Périn C., Bureau C., Meunier A.C., Ingouff M., Bennett M.J., Liang W., Zhang D.
Front Plant Sci 2017  8  256
Dynamic Regulation of Auxin Response during Rice Development Revealed by Newly Established Hormone Biosensor Markers.
Cho S.H., Paek N.C.
Plant Signal Behav 2016  11(6)  e1184807
Regulatory role of the OsWOX3A transcription factor in rice root development.
Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014  61  608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
Zou Y., Liu X., Wang Q., Chen Y., Liu C., Qiu Y., Zhang W.
Biochim. Biophys. Acta 2014  1840(6)  1676-1685
OsRPK1, a novel leucine-rich repeat receptor-like kinase, negatively regulates polar auxin transport and root development in rice.
Chen Y., Fan X., Song W., Zhang Y., Xu G.
Plant Biotechnol. J. 2012  10(2)  139-49
Over-expression of OsPIN2 leads to increased tiller numbers, angle and shorter plant height through suppression of OsLazy1.
Miyashita Y., Takasugi T., Ito Y.
Plant Science 2010  178  424-428
Identification and expression analysis of PIN genes in rice
ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010  277(14)  2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
Wang JR,Hu H,Wang GH,Li J,Chen JY,Wu P
Mol Plant 2009  2(4)  823-31
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
Xu M, Zhu L, Shou H, Wu P.
Plant Cell Physiol. 2005  46(10)  1674-81
A PIN1 family gene, OsPIN1, involved in auxin-dependent adventitious root emergence and tillering in rice.
MORITA Y., KYOZUKA J.
RGN 2004  21  87-88
Identification of rice PIN homologs
TextPresso Search Search textpresso for PIN1C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology integral to membrane( GO:0016021 )
transmembrane transport( GO:0055085 )
auxin polar transport( GO:0009926 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
floral organ formation( GO:0048449 )
Trait Ontology auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
floral organ development trait( TO:0006022 )
Plant Ontology floral organ differentiation stage( PO:0007600 )
lemma( PO:0009037 )
flower bract primordium( PO:0025488 )
anther vascular system( PO:0008013 )
anther( PO:0009066 )
gynoecium primordium( PO:0000019 )
Related Strains
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Phenotype images
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Last updated
Jan 20, 2022


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