Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RCN1
Gene Symbol Synonym Rcn1, FDR2, Fdr2, RCN1/FDR2, OsRCN1
CGSNL Gene Name RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 1
Gene Name Synonym Cen-like protein FDR2, RICE CENTRORADIALIS 1
Protein Name RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 1
Allele
Chromosome No. 11
Explanation Putative phosphatidylethanolamine-binding protein, Putative TFL1/CEN ortholog. TFL1/CEN-like gene. AF159882(Plant J.29 (6)743-750(2002)). PO:0006318; floret (sensu Poaceae) ; PO:0009049; inflorescence ; PO:0000230; inflorescence meristem ; PO:0009025; leaf ; PO:0020039; leaf lamina ; PO:0020104; leaf sheath ; PO:0009005; root ; PO:0006321; second order inflorescence branch ; PO:0020148; shoot apical meristem ; PO:0006322; third order inflorescence branch. GRO:0007048; 04-stem elongation stage ; GRO:0007189; panicle stage PA1 ; GRO:0007044; 06-heading stage. AF159882. LOC_Os11g05470.
Trait Class Reproductive organ - Heading date
Expression
Sequence/Locus
cDNA Accession No. AF159882
MSU ID LOC_Os11g05470.1
RAP ID Os11g0152500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(50)  15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
Zhang,S., Hu,W., Wang,L., Lin,C., Cong,B., Sun,C. and Luo,D.
Plant Sci. 2005  168(6)  1393-1408
TFL1/CEN-like genes control intercalary meristem activity and phase transition in rice
Chardon F., Damerval C.
J. Mol. Evol. 2005  61(5)  579-90
Phylogenomic analysis of the PEBP gene family in cereals.
Nakagawa, M., K. Shimamoto and J. Kyozuka
Plant J. 2002  29 (6)  743-750
C2, rice TERMIAL FLOWER 1/CENTRORADIALIS homologs, confers delay of phase transition and altered panicle morphology in rice.
TextPresso Search Search textpresso for RCN1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0100117
Ontologies
Gene Ontology phosphatidylethanolamine binding( GO:0008429 )
inflorescence development( GO:0010229 )
regulation of timing of transition from vegetative to reproductive phase( GO:0048510 )
Trait Ontology days to heading( TO:0000137 )
secondary branch number( TO:0000557 )
Plant Ontology shoot apical meristem( PO:0020148 )
leaf sheath( PO:0020104 )
leaf lamina( PO:0020039 )
inflorescence( PO:0009049 )
vascular leaf( PO:0009025 )
root( PO:0009005 )
second order inflorescence branch( PO:0006322 )
primary inflorescence branch( PO:0006321 )
spikelet floret( PO:0009082 )
inflorescence meristem( PO:0000230 )
Related Strains
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Phenotype images
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Last updated
Dec 30, 2018


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