Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol WRKY62
Gene Symbol Synonym OsWRKY62, OsWRKY62.1, OsWRKY62.2, XB10
Gene Name Synonym Rice WRKY gene62, XA21 binding protein 10, WRKY transcription factor 62
Chromosome No. 9
Explanation BK005065. DQ298182. DAA05127. WRKY14 in Zhang and Wang (2005) and in Berri et al. (2009). WRKY82 in Wu et al. (2005) and Sun et al. 2014. GO:1900150 regulation of defense response to fungus. GO:1900425 negative regulation of defense response to bacterium. GO:2000378: negative regulation of reactive oxygen species metabolic process. TO:0020076: phenolic compound content. GO:0080142: regulation of salicylic acid biosynthetic process. GO:2000022: regulation of jasmonic acid mediated signaling pathway. GO:0080141: regulation of jasmonic acid biosynthetic process. GO:0062207: regulation of pattern recognition receptor signaling pathway.
Trait Class Vegetative organ - Root
Tolerance and resistance - Insect resistance
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK067834
MSU ID LOC_Os09g25070.1
RAP ID Os09g0417800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Islam F., Khan M.S.S., Ahmed S., Abdullah M., Hannan F., Chen J.
Free Radic. Biol. Med. 2023  199  2-16
OsLPXC negatively regulates tolerance to cold stress via modulating oxidative stress, antioxidant defense and JA accumulation in rice.
Shi X., Xiong Y., Zhang K., Zhang Y., Zhang J., Zhang L., Xiao Y., Wang G.L., Liu W.
Mol Plant 2023  16(4)  739-755
The ANIP1-OsWRKY62 module regulates both basal defense and Pi9-mediated immunity against Magnaporthe oryzae in rice.
Islam M.R., Chowdhury R., Roy A.S., Islam M.N., Mita M.M., Bashar S., Saha P., Rahat R.A., Hasan M., Akter M.A., Alam M.Z., Latif M.A.
Plants (Basel) 2023  12(9) 
Native <i>Trichoderma</i> Induced the Defense-Related Enzymes and Genes in Rice against <i>Xanthomonas oryzae</i> pv. <i>oryzae</i> (<i>Xoo</i>).
Feng T., Zhang Z.Y., Gao P., Feng Z.M., Zuo S.M., Ouyang S.Q.
Int J Mol Sci 2023  24(4) 
Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway.
Feng H., Qiu T., Yin C., Zhao X., Xu G., Qi L., Zhang Y., Peng Y., Zhao W.
Int J Mol Sci 2022  23(10) 
The Rice Malectin Regulates Plant Cell Death and disease resistance by Participating in Glycoprotein Quality Control.
Khan I., Jan R., Asaf S., Khan A.L., Bilal S., Kim K.M., Al-Harrasi A.
Int J Mol Sci 2022  23(23) 
Genome and Transcriptome-Wide Analysis of <i>OsWRKY</i> and <i>OsNAC</i> Gene Families in <i>Oryza sativa</i> and Their Response to White-Backed Planthopper Infestation.
Zhu Z., Wang T., Lan J., Ma J., Xu H., Yang Z., Guo Y., Chen Y., Zhang J., Dou S., Yang M., Li L., Liu G.
Rice (N Y) 2022  15(1)  41
Rice MPK17 Plays a Negative Role in the Xa21-Mediated Resistance Against Xanthomonas oryzae pv. oryzae.
Xu X., Wang H., Liu J., Han S., Lin M., Guo Z., Chen X.
Rice (N Y) 2022  15(1)  12
OsWRKY62 and OsWRKY76 Interact with Importin alpha1s for Negative Regulation of Defensive Responses in Rice Nucleus.
Viana V.E., Carlos da Maia L., Busanello C., Pegoraro C., Costa de Oliveira A.
Plant Biol (Stuttg) 2021  23 Suppl 1  100-112
When rice gets the chills: comparative transcriptome profiling at germination shows WRKY transcription factor responses.
Wang H., Bi Y., Gao Y., Yan Y., Yuan X., Xiong X., Wang J., Liang J., Li D., Song F.
Front Plant Sci 2021  12  802758
A Pathogen-Inducible Rice NAC transcription factor ONAC096 Contributes to Immunity Against <i>Magnaprothe oryzae</i> and <i>Xanthomonas oryzae</i> pv. <i>oryzae</i> by Direct Binding to the Promoters of <i>OsRap2.6</i>, <i>OsWRKY62</i>, and <i>OsPAL1</i>.
Yuan X., Wang H., Bi Y., Yan Y., Gao Y., Xiong X., Wang J., Li D., Song F.
Front Plant Sci 2021  12  749186
ONAC066, A Stress-Responsive NAC Transcription Activator, Positively Contributes to Rice Immunity Against <i>Magnaprothe oryzae</i> Through Modulating Expression of <i>OsWRKY62</i> and Three Cytochrome P450 Genes.
Qiu T., Zhao X., Feng H., Qi L., Yang J., You-Liang Peng, Zhao W.
Plant Biotechnol. J. 2021  19(11)  2277-2290
OsNBL3, a mitochondrion-localized pentatricopeptide repeat protein, is involved in splicing nad5 intron 4 and its disruption causes lesion mimic phenotype with enhanced resistance to biotic and abiotic stresses.
Wang Y., Huang L., Du F., Wang J., Zhao X., Li Z., Wang W., Xu J., Fu B.
Sci Rep 2021  11(1)  5166
Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice.
Valette M., Rey M., Doré J., Gerin F., Wisniewski-Dyé F.
Physiol Mol Biol Plants 2020  26(12)  2537-2551
Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria.
Wang H.L., Yang S.H., Lv M., Ding S.W., Li J.Y., Xu C.L., Xie H.
Funct. Integr. Genomics 2020  20(3)  367-381
RNA-Seq revealed that infection with white tip nematodes could downregulate rice photosynthetic genes.
Hoang T.V., Vo K.T.X., Rahman M.M., Choi S.H., Jeon J.S.
Plant Sci. 2019  289  110273
Heat stress transcription factor OsSPL7 plays a critical role in reactive oxygen species balance and stress responses in rice.
Uji Y., Kashihara K., Kiyama H., Mochizuki S., Akimitsu K., Gomi K.
Int J Mol Sci 2019  20(12) 
Jasmonic Acid-Induced VQ-Motif-Containing Protein OsVQ13 Influences the OsWRKY45 Signaling Pathway and grain size by Associating with OsMPK6 in Rice.
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Filipe O., De Vleesschauwer D., Haeck A., Demeestere K., Höfte M.
Sci Rep 2018  8(1)  3864
The energy sensor OsSnRK1a confers broad-spectrum disease resistance in rice.
Xu L., Zhao H., Ruan W., Deng M., Wang F., Peng J., Luo J., Chen Z., Yi K.
Plant Cell 2017  29(3)  560-574
ABNORMAL INFLORESCENCE MERISTEM1 Functions in Salicylic Acid Biosynthesis to Maintain Proper Reactive Oxygen Species Levels for root meristem Activity in Rice.
Takatsuji H.
Front Plant Sci 2017  8  171
Regulating Tradeoffs to Improve Rice Production.
Liang X., Chen X., Li C., Fan J., Guo Z.
Sci Rep 2017  7(1)  2474
Metabolic and transcriptional alternations for defense by interfering OsWRKY62 and OsWRKY76 transcriptions in rice.
Choi N.Y., Lee E., Lee S.G., Choi C.H., Park S.R., Ahn I., Bae S.C., Hwang C.H., Hwang D.J.
Front Plant Sci 2017  8  1628
Genome-Wide Expression Profiling of OsWRKY Superfamily Genes during Infection with Xanthomonas oryzae pv. oryzae Using Real-Time PCR.
Fukushima S., Mori M., Sugano S., Takatsuji H.
Plant Cell Physiol. 2016  57(12)  2541-2551
Transcription Factor WRKY62 Plays a Role in Pathogen Defense and Hypoxia-Responsive Gene Expression in Rice.
Liu J., Chen X., Liang X., Zhou X., Yang F., Liu J., He S.Y., Guo Z.
Plant Physiol. 2016   
Alternative splicing of rice WRKY62 and WRKY76 transcription factor genes in pathogen defense.
Lee D.K., Kim H.I., Jang G., Chung P.J., Jeong J.S., Kim Y.S., Bang S.W., Jung H., Choi Y.D., Kim J.K.
Plant Sci. 2015  241  199-210
The NF-YA transcription factor OsNF-YA7 confers drought stress tolerance of rice in an abscisic acid independent manner.
Sun L.J.a, Huang L.b, Li D.Y.b, Zhang H.J.b, Song F.M.b
Zhiwu Shengli Xuebao/Plant Physiology Journal 2014  50  1651-1658
Comprehensive expression analysis suggests overlapping of rice OsWRKY transcription factor genes during abiotic stress responses
Chujo T., Miyamoto K., Shimogawa T., Shimizu T., Otake Y., Yokotani N., Nishizawa Y., Shibuya N., Nojiri H., Yamane H., Minami E., Okada K.
Plant Mol. Biol. 2013  82(1-2)  23-37
OsWRKY28, a PAMP-responsive transrepressor, negatively regulates innate immune responses in rice against rice blast fungus.
Nakayama A., Fukushima S., Goto S., Matsushita A., Shimono M., Sugano S., Jiang C.J., Akagi A., Yamazaki M., Inoue H., Takatsuji H.
BMC Plant Biol. 2013  13  150
Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
Park C.J., Ronald P.C.
Nat Commun 2012  3  920
Cleavage and nuclear localization of the rice XA21 immune receptor.
Matsushita A., Inoue H., Goto S., Nakayama A., Sugano S., Hayashi N., Takatsuji H.
Plant J. 2012   
The nuclear ubiquitin proteasome degradation affects WRKY45 function in the rice defense program.
Rice WRKY Working Group
Rice (N Y) 2012  5  3
Nomenclature report on rice WRKYs. -Conflict regarding gene names and its solution
Kano A., Hosotani K., Gomi K., Yamasaki-Kokudo Y., Shirakawa C., Fukumoto T., Ohtani K., Tajima S., Izumori K., Tanaka K., Ishida Y., Nishizawa Y., Ichimura K., Tada Y., Akimitsu K.
J. Plant Physiol. 2011  168(15)  1852-7
D-Psicose induces upregulation of defense-related genes and resistance in rice against bacterial blight.
Chang-Jin Park, Sang-Wook Han, Chen X., Pamela C Ronald
Cell. Microbiol. 2010  12(8)  1017-25
Elucidation of Xa21-mediated innate immunity.
Chen X., Chern M., Patrick E Canlas, Jiang C., Ruan D., Cao P., Pamela C Ronald
J. Biol. Chem. 2010  285(14)  10454-63
A conserved threonine residue in the juxtamembrane domain of the XA21 pattern recognition receptor is critical for kinase autophosphorylation and XA21-mediated immunity.
Berri S,Abbruscato P,Faivre-Rampant O,Brasileiro AC,Fumasoni I,Satoh K,Kikuchi S,Mizzi L,Morandini P,Pe ME,Piffanelli P
BMC Plant Biol 2009  9  120
Characterization of WRKY co-regulatory networks in rice and Arabidopsis.
Peng Y., Laura E Bartley, Chen X., Dardick C., Chern M., Ruan R., Patrick E Canlas, Pamela C Ronald
Mol Plant 2008  1(3)  446-58
OsWRKY62 is a negative regulator of basal and Xa21-mediated defense against Xanthomonas oryzae pv. oryzae in rice.
Christian A. Ross Yue Liu Qingxi J. Shen
Journal of integrative plant biology 2007  49(6)  827-842
The WRKY Gene Family in Rice (Oryza sativa)
Shimono M,Sugano S,Nakayama A,Jiang CJ,Ono K,Toki S,Takatsuji H
Plant Cell 2007  19  2064-76
Rice WRKY45 plays a crucial role in benzothiadiazole-inducible blast resistance.
Ryu,H.S., Han,M., Lee,S.K., Cho,J.I., Ryoo,N., Heu,S., Lee,Y.H., Bhoo,S.H., Wang,G.L., Hahn,T.R. and Jeon,J.S.
Plant Cell Rep. 2006  25(8)  836-847
A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response.
Zhang Y., Wang L.
BMC evolutionary biology 2005  5  1
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
Kun-Lu Wu, Ze-Jian Guo, Hai-Hua Wang, Li J.
DNA research : an international journal for rapid publication of reports on genes and genomes 2005  12(1)  9-26
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
Xie Z, Zhang ZL, Zou X, Huang J, Ruas P, Thompson D, Shen QJ.
Plant Physiol. 2005  137 (1)  176-189
Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells
Zhang,Z.L., Xie,Z., Zou,X., Casaretto,J., Ho,T.H. and Shen,Q.J.
Plant Physiol. 2004  134 (4)  1500-1513
A Rice WRKY Gene Encodes a Transcriptional Repressor of the Gibberellin Signaling Pathway in Aleurone Cells
Qiu,Y., Jing,S., Fu,J., Li,L. and Yu,D.
Chin. Sci. Bull. 2004  49  2159-2168
Cloning and analysis of expression profile of 13 WRKY genes in rice
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DB Reference
Gramene ID -
Gene Ontology response to salt stress( GO:0009651 )
response to molecule of bacterial origin( GO:0002237 )
response to molecule of fungal origin( GO:0002238 )
response to jasmonic acid stimulus( GO:0009753 )
positive regulation of defense response( GO:0031349 )
negative regulation of defense response( GO:0031348 )
response to salicylic acid stimulus( GO:0009751 )
phenylpropanoid biosynthetic process( GO:0009699 )
defense response to bacterium( GO:0042742 )
sequence-specific DNA binding( GO:0043565 )
defense response to fungus( GO:0050832 )
negative regulation of transcription, DNA-dependent( GO:0045892 )
root development( GO:0048364 )
jasmonic acid mediated signaling pathway( GO:0009867 )
response to nematode( GO:0009624 )
transcription factor activity( GO:0003700 )
defense response( GO:0006952 )
response to water deprivation( GO:0009414 )
response to wounding( GO:0009611 )
salicylic acid biosynthetic process( GO:0009697 )
jasmonic acid biosynthetic process( GO:0009695 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
response to cold( GO:0009409 )
defense response to insect( GO:0002213 )
response to fungus( GO:0009620 )
response to hypoxia( GO:0001666 )
Trait Ontology salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
blast disease( TO:0000074 )
root length( TO:0000227 )
root development trait( TO:0000656 )
jasmonic acid content( TO:0002668 )
jasmonic acid sensitivity( TO:0000172 )
bacterial blight disease resistance( TO:0000175 )
cold tolerance( TO:0000303 )
white-backed planthopper resistance( TO:0000205 )
sheath blight disease resistance( TO:0000255 )
disease resistance( TO:0000112 )
Plant Ontology root( PO:0009005 )
4 root elongation stage( PO:0001031 )
Related Strains
Phenotype images
Last updated
Nov 2, 2023