Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol WRKY55
Gene Symbol Synonym OsWRKY55
Gene Name Synonym Rice WRKY gene55
Allele w31ko
Chromosome No. 3
Explanation BK005058. CF282152, CF330819, CF303772, CF282153, CF330818, CF305084, CF328161. WRKY72 in Zhang and Wang (2005) and in Berri et al. (2009). WRKY31 in Wu et al. (2005), Phule et al. 2018, Wang et al. 2023, Laflamme 2023, Naithani et al. 2023. PO:0030123: panicle inflorescence. GO:0140426: pathogen-associated molecular pattern receptor signaling pathway.
Trait Class Character as QTL - Germination
Tolerance and resistance - Disease resistance
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK101653
MSU ID LOC_Os03g20550.1
RAP ID Os03g0321700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Shi H., Xiong Q., Zhao Z., Zhou L., Yin J., Lu X., Chen X., Wang J.
Rice (N Y) 2023  16(1)  42
Disruption of the Novel Small Protein Rbr7 Leads to Enhanced Plant Resistance to Blast Disease.
Naithani S., Mohanty B., Elser J., D'Eustachio P., Jaiswal P.
Plants (Basel) 2023  12(11) 
Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (<i>Oryza sativa</i>).
Jung H., Park H.J., Jo S.H., Lee A., Lee H.J., Kim H.S., Jung C., Cho H.S.
New Phytol. 2023  238(6)  2476-2494
Nuclear OsFKBP20-1b maintains SR34 stability and promotes the splicing of retained introns upon ABA exposure in rice.
Wang S., Han S., Zhou X., Zhao C., Guo L., Zhang J., Liu F., Huo Q., Zhao W., Guo Z., Chen X.
Plant Cell 2023  35(6)  2391-2412
Phosphorylation and ubiquitination of OsWRKY31 are integral to OsMKK10-2-mediated defense responses in rice.
Laflamme B.
Plant Cell 2023  35(6)  1968-1969
WRKYng together: Coordination between kinase cascades and transcription factors contributes to immunity in rice.
Huang K., Wu T., Ma Z., Li Z., Chen H., Zhang M., Bian M., Bai H., Jiang W., Du X.
Int J Mol Sci 2021  22(9) 
Rice Transcription Factor OsWRKY55 Is Involved in the Drought Response and Regulation of Plant Growth.
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018  8(9)  383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
Choi N.Y., Lee E., Lee S.G., Choi C.H., Park S.R., Ahn I., Bae S.C., Hwang C.H., Hwang D.J.
Front Plant Sci 2017  8  1628
Genome-Wide Expression Profiling of OsWRKY Superfamily Genes during Infection with Xanthomonas oryzae pv. oryzae Using Real-Time PCR.
Rice WRKY Working Group
Rice (N Y) 2012  5  3
Nomenclature report on rice WRKYs. -Conflict regarding gene names and its solution
Berri S,Abbruscato P,Faivre-Rampant O,Brasileiro AC,Fumasoni I,Satoh K,Kikuchi S,Mizzi L,Morandini P,Pe ME,Piffanelli P
BMC Plant Biol 2009  9  120
Characterization of WRKY co-regulatory networks in rice and Arabidopsis.
Christian A. Ross Yue Liu Qingxi J. Shen
Journal of integrative plant biology 2007  49(6)  827-842
The WRKY Gene Family in Rice (Oryza sativa)
Ryu,H.S., Han,M., Lee,S.K., Cho,J.I., Ryoo,N., Heu,S., Lee,Y.H., Bhoo,S.H., Wang,G.L., Hahn,T.R. and Jeon,J.S.
Plant Cell Rep. 2006  25(8)  836-847
A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response.
Xie Z, Zhang ZL, Zou X, Huang J, Ruas P, Thompson D, Shen QJ.
Plant Physiol. 2005  137 (1)  176-189
Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells
Kun-Lu Wu, Ze-Jian Guo, Hai-Hua Wang, Li J.
DNA research : an international journal for rapid publication of reports on genes and genomes 2005  12(1)  9-26
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
Zhang Y., Wang L.
BMC evolutionary biology 2005  5  1
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
Zhang,Z.L., Xie,Z., Zou,X., Casaretto,J., Ho,T.H. and Shen,Q.J.
Plant Physiol. 2004  134 (4)  1500-1513
A Rice WRKY Gene Encodes a Transcriptional Repressor of the Gibberellin Signaling Pathway in Aleurone Cells
Qiu,Y., Jing,S., Fu,J., Li,L. and Yu,D.
Chin. Sci. Bull. 2004  49  2159-2168
Cloning and analysis of expression profile of 13 WRKY genes in rice
TextPresso Search Search textpresso for WRKY55 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology seed germination( GO:0009845 )
response to flooding( GO:0009413 )
response to gravity( GO:0009629 )
response to molecule of fungal origin( GO:0002238 )
response to chitin( GO:0010200 )
auxin mediated signaling pathway( GO:0009734 )
nucleus( GO:0005634 )
defense response to fungus( GO:0050832 )
response to abscisic acid stimulus( GO:0009737 )
cell growth( GO:0016049 )
response to water deprivation( GO:0009414 )
sequence-specific DNA binding( GO:0043565 )
defense response( GO:0006952 )
transcription factor activity( GO:0003700 )
defense response to bacterium( GO:0042742 )
response to anoxia( GO:0034059 )
Trait Ontology bacterial blight disease resistance( TO:0000175 )
drought tolerance( TO:0000276 )
plant height( TO:0000207 )
internode length( TO:0000145 )
hydrogen peroxide content( TO:0000605 )
abscisic acid sensitivity( TO:0000615 )
blast disease( TO:0000074 )
submergence tolerance( TO:0000524 )
gravity response trait( TO:0002693 )
Plant Ontology root( PO:0009005 )
flag leaf( PO:0020103 )
leaf sheath( PO:0020104 )
inflorescence( PO:0009049 )
0 seed germination stage( PO:0007057 )
coleoptile emergence stage( PO:0007045 )
Related Strains
Phenotype images
Last updated
Dec 18, 2023