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Basic Information
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CGSNL Gene Symbol
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WRKY53
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Gene Symbol Synonym
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OsWRKY53, WRKY-53, OsWRKY53-1, WRKY53-1
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CGSNL Gene Name
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WRKY GENE 53
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Gene Name Synonym
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Rice WRKY gene53
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Protein Name
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TRANSCRIPTION FACTOR WRKY53
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Allele
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oswrky53, wrky53, Cr-oswrky53
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Chromosome No.
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5
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Explanation
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BK005056. XB21 interacting protein (XB21IP). the target of miRNA novel-0586-5p (Fang et al. 2017). WRKY61 in Zhang and Wang (2005) and in Berri et al. (2009). WRKY51 in Wu et al. (2005) and Sun et al. 2014. OsWRKY53-1 in Meher et al. 2023. GO:1900459: positive regulation of brassinosteroid mediated signaling pathway. GO:1903276: regulation of sodium ion export across plasma membrane. GO:1901001: negative regulation of response to salt stress.
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Trait Class
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Vegetative organ - Leaf
Seed - Morphological traits
Seed - Morphological traits - Grain shape
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK121190
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MSU ID
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LOC_Os05g27730.1
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RAP ID
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Os05g0343400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
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RAP-DB
(
IRGSP 1.0
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Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Chen D., Shi Y., Zhang P., Xie W., Li S., Xiao J., Yuan M.
Plant Physiol. 2024 195(3) 2176-2194
Deletion of the sugar importer gene OsSWEET1b accelerates sugar starvation-promoted leaf senescence in rice.
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Meng F., Zheng X., Wang J., Qiu T., Yang Q., Fang K., Bhadauria V., Peng Y.L., Zhao W.
Plant Biotechnol. J. 2023
The GRAS protein OsDLA involves in brassinosteroid signalling and positively regulates blast resistance by forming a module with GSK2 and OsWRKY53 in rice.
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Meher J., Sarkar A., Sarma B.K.
3 Biotech 2023 13(9) 294
Binding of stress-responsive OsWRKY proteins through WRKYGQK heptapeptide residue with the promoter region of two rice blast disease resistance genes <i>Pi2</i> and <i>Pi54</i> is important for development of blast resistance.
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Li J., Chen Y., Zhang R., Wu B., Xiao G.
Plant Signal Behav 2023 18(1) 2292844
Expression identification of three <i>OsWRKY</i> genes in response to abiotic stress and hormone treatments in rice.
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Xu J., Wang C., Wang F., Liu Y., Li M., Wang H., Zheng Y., Zhao K., Ji Z.
Plant Biotechnol. J. 2023
pwl1, a G-type lectin receptor-like kinase, positively regulates leaf senescence and heat tolerance but negatively regulates resistance to Xanthomonas oryzae in rice.
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Jia Q., Zhang X., Liu Q., Li J., Wang W., Ma X., Zhu B., Li S., Gong S., Tian J., Yuan M., Zhao Y., Zhou D.X.
Genome Biol. 2023 24(1) 198
A DNA adenine demethylase impairs PRC2-mediated repression of genes marked by a specific chromatin signature.
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Yang Y., Zhang Y., Zhang L., Zhou Z., Zhang J., Yang J., Gao X., Chen R., Huang Z., Xu Z., Li L.
Int J Mol Sci 2023 24(10)
Isolation of <i>Bacillus siamensis</i> B-612, a Strain That Is Resistant to Rice blast disease and an Investigation of the Mechanisms Responsible for Suppressing Rice Blast Fungus.
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Yu J., Zhu C., Xuan W., An H., Tian Y., Wang B., Chi W., Chen G., Ge Y., Li J., Dai Z., Liu Y., Sun Z., Xu D., Wang C., Wan J.
Nat Commun 2023 14(1) 3550
Genome-wide association studies identify OsWRKY53 as a key regulator of salt tolerance in rice.
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Hao Z., Tian J., Fang H., Fang L., Xu X., He F., Li S., Xie W., Du Q., You X., Wang D., Chen Q., Wang R., Zuo S., Yuan M., Wang G.L., Xia L., Ning Y.
Cell Rep 2022 40(7) 111235
A VQ-motif-containing protein fine-tunes rice immunity and growth by a hierarchical regulatory mechanism.
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Mei E., Tang J., He M., Liu Z., Tian X., Bu Q.
Int J Mol Sci 2022 23(22)
OsMKKK70 Negatively Regulates cold tolerance at Booting Stage in Rice.
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Yang X., Gu X., Ding J., Yao L., Gao X., Zhang M., Meng Q., Wei S., Fu J.
BMC Genomics 2022 23(1) 278
Gene expression analysis of resistant and susceptible rice cultivars to sheath blight after inoculation with Rhizoctonia solani.
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Ye M., Kuai P., Chen S., Lin N., Ye M., Hu L., Lou Y.
Int J Mol Sci 2021 22(22)
Silencing a Simple extracellular leucine-rich repeat Gene <i>OsI-BAK1</i> Enhances the Resistance of Rice to Brown Planthopper <i>Nilaparvata lugens</i>.
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Tian X., He M., Mei E., Zhang B., Tang J., Xu M., Liu J., Li X., Wang Z., Tang W., Guan Q., Bu Q.
Plant Cell 2021
WRKY53 Integrates Classic Brassinosteroid Signaling and the Mitogen-Activated Protein Kinase Pathway to Regulate Rice Architecture and seed size.
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Viana V.E., Carlos da Maia L., Busanello C., Pegoraro C., Costa de Oliveira A.
Plant Biol (Stuttg) 2021 23 Suppl 1 100-112
When rice gets the chills: comparative transcriptome profiling at germination shows WRKY transcription factor responses.
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R A O Yuchun, J I A O Ran, W A N G Sheng, W U Xianmei, Y E Hanfei, P A N Chenyang, L I Sanfeng, Dedong X., Z H O U Weiyong, D A I Gaoxing, H U Juan, R E N Deyong, W A N G Yuexing
Rice (N Y) 2021 14(1) 34
SPL36 Encodes a Receptor-like Protein Kinase that Regulates Programmed Cell Death and Defense Responses in Rice.
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Han R., He X., Pan X., Shi Q., Wu Z.
Rice (N Y) 2020 13(1) 16
Enhancing xanthine dehydrogenase activity is an effective way to delay leaf senescence and increase rice yield.
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Dong Z., Li W., Liu J., Li L., Pan S., Liu S., Gao J., Liu L., Liu X., Wang G.L., Dai L.
Sci Rep 2019 9(1) 5408
The Rice Phosphate Transporter Protein OsPT8 Regulates disease resistance and Plant Growth.
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Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019 100(1-2) 133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
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Hu L., Ye M., Kuai P., Ye M., Erb M., Lou Y.
New Phytol. 2018 219(3) 1097-1111
OsLRR-RLK1, an early responsive leucine-rich repeat receptor-like kinase, initiates rice defense responses against a chewing herbivore.
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Wang T., Zou T., He Z., Yuan G., Luo T., Zhu J., Liang Y., Deng Q., Wang S., Zheng A., Liu H., Wang L., Li P., Li S.
J Integr Plant Biol 2018
GRAIN LENGTH AND AWN 1 negatively regulates grain size in rice.
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Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018 18(1) 335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
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Tian X., Li X., Zhou W., Ren Y., Wang Z., Liu Z., Tang J., Tong H., Fang J., Bu Q.
Plant Physiol. 2017 175(3) 1337-1349
Transcription Factor OsWRKY53 Positively Regulates Brassinosteroid Signaling and Plant Architecture.
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Caddell D.F., Park C.J., Thomas N.C., Canlas P.E., Ronald P.C.
Rice (N Y) 2017 10(1) 23
Silencing of the Rice Gene LRR1 Compromises Rice XA21 transcript Accumulation and XA21-Mediated Immunity.
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Fang C., Zhang P., Jian X., Chen W., Lin H., Li Y., Lin W.
Plant Sci. 2017 262 115-126
Overexpression of Lsi1 in cold-sensitive rice mediates transcriptional regulatory networks and enhances resistance to chilling stress.
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Yang X., Gong P., Li K., Huang F., Cheng F., Pan G.
J. Exp. Bot. 2016 67(9) 2761-76
A single cytosine deletion in the OsPLS1 gene encoding vacuolar-type H+-ATPase subunit A1 leads to premature leaf senescence and seed dormancy in rice.
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Yang Y.W., Chen H.C., Jen W.F., Liu L.Y., Chang M.C.
PLoS ONE 2015 10(7) e0131391
Comparative Transcriptome Analysis of Shoots and Roots of TNG67 and TCN1 Rice Seedlings under Cold Stress and Following Subsequent Recovery: Insights into Metabolic Pathways, Phytohormones, and Transcription Factors.
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Chujo T., Miyamoto K., Ogawa S., Masuda Y., Shimizu T., Kishi-Kaboshi M., Takahashi A., Nishizawa Y., Minami E., Nojiri H., Yamane H., Okada K.
PLoS ONE 2014 9(6) e98737
Overexpression of phosphomimic mutated OsWRKY53 leads to enhanced blast resistance in rice.
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Yoo S.J., Kim S.H., Kim M.J., Ryu C.M., Kim Y.C., Cho B.H., Yang K.Y.
Plant Pathol. J. 2014 30(2) 168-77
Involvement of the OsMKK4-OsMPK1 Cascade and its Downstream Transcription Factor OsWRKY53 in the Wounding Response in Rice.
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Sun L.J.a, Huang L.b, Li D.Y.b, Zhang H.J.b, Song F.M.b
Zhiwu Shengli Xuebao/Plant Physiology Journal 2014 50 1651-1658
Comprehensive expression analysis suggests overlapping of rice OsWRKY transcription factor genes during abiotic stress responses
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Ye M., Song Y., Long J., Wang R., Baerson S.R., Pan Z., Zhu-Salzman K., Xie J., Cai K., Luo S., Zeng R.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(38) E3631-9
Priming of jasmonate-mediated antiherbivore defense responses in rice by silicon.
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Rice WRKY Working Group
Rice (N Y) 2012 5 3
Nomenclature report on rice WRKYs. -Conflict regarding gene names and its solution
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Ding B., Bellizzi Mdel R., Ning Y., Meyers B.C., Wang G.L.
Plant Cell 2012 24(9) 3783-94
HDT701, a histone H4 deacetylase, negatively regulates plant innate immunity by modulating histone H4 acetylation of defense-related genes in rice.
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Berri S,Abbruscato P,Faivre-Rampant O,Brasileiro AC,Fumasoni I,Satoh K,Kikuchi S,Mizzi L,Morandini P,Pe ME,Piffanelli P
BMC Plant Biol 2009 9 120
Characterization of WRKY co-regulatory networks in rice and Arabidopsis.
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Chujo,T., Takai,R., Akimoto-Tomiyama,C., Ando,S., Minami,E., Nagamura,Y., Kaku,H., Shibuya,N., Yasuda,M., Nakashita,H., Umemura,K., Okada,A., Okada,K., Nojiri,H. and Yamane,H.
Biochim. Biophys. Acta 2007 1769(7-8) 497-505
Involvement of the elicitor-induced gene OsWRKY53 in the expression of defense-related genes in rice
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Christian A. Ross Yue Liu Qingxi J. Shen
Journal of integrative plant biology 2007 49(6) 827-842
The WRKY Gene Family in Rice (Oryza sativa)
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Ryu,H.S., Han,M., Lee,S.K., Cho,J.I., Ryoo,N., Heu,S., Lee,Y.H., Bhoo,S.H., Wang,G.L., Hahn,T.R. and Jeon,J.S.
Plant Cell Rep. 2006 25(8) 836-847
A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response.
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Kun-Lu Wu, Ze-Jian Guo, Hai-Hua Wang, Li J.
DNA research : an international journal for rapid publication of reports on genes and genomes 2005 12(1) 9-26
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
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Xie Z, Zhang ZL, Zou X, Huang J, Ruas P, Thompson D, Shen QJ.
Plant Physiol. 2005 137 (1) 176-189
Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells
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Zhang Y., Wang L.
BMC evolutionary biology 2005 5 1
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
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Zhang,Z.L., Xie,Z., Zou,X., Casaretto,J., Ho,T.H. and Shen,Q.J.
Plant Physiol. 2004 134 (4) 1500-1513
A Rice WRKY Gene Encodes a Transcriptional Repressor of the Gibberellin Signaling Pathway in Aleurone Cells
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Qiu,Y., Jing,S., Fu,J., Li,L. and Yu,D.
Chin. Sci. Bull. 2004 49 2159-2168
Cloning and analysis of expression profile of 13 WRKY genes in rice
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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negative regulation of transcription, DNA-dependent( GO:0045892 )
response to hexose stimulus( GO:0009746 )
leaf senescence( GO:0010150 )
response to absence of light( GO:0009646 )
response to abscisic acid stimulus( GO:0009737 )
response to gibberellin stimulus( GO:0009739 )
response to salicylic acid stimulus( GO:0009751 )
response to jasmonic acid stimulus( GO:0009753 )
sodium ion homeostasis( GO:0055078 )
metal ion homeostasis( GO:0055065 )
response to symbiotic bacterium( GO:0009609 )
response to molecule of bacterial origin( GO:0002237 )
nucleus( GO:0005634 )
positive regulation of defense response( GO:0031349 )
unidimensional cell growth( GO:0009826 )
regulation of cell proliferation( GO:0042127 )
response to water deprivation( GO:0009414 )
transcription factor activity( GO:0003700 )
defense response( GO:0006952 )
response to wounding( GO:0009611 )
sequence-specific DNA binding( GO:0043565 )
defense response to fungus( GO:0050832 )
response to heat( GO:0009408 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
response to brassinosteroid stimulus( GO:0009741 )
brassinosteroid mediated signaling( GO:0009742 )
defense response to insect( GO:0002213 )
response to herbivore( GO:0080027 )
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Trait Ontology
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blast disease( TO:0000074 )
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
leaf angle( TO:0000206 )
grain size( TO:0000397 )
seed size( TO:0000391 )
brassinosteroid sensitivity( TO:0002677 )
stem borer resistance( TO:0000454 )
brown planthopper resistance( TO:0000424 )
sheath blight disease resistance( TO:0000255 )
growth and development trait( TO:0000357 )
grain length( TO:0000734 )
light intensity sensitivity( TO:0000460 )
abscisic acid sensitivity( TO:0000615 )
jasmonic acid sensitivity( TO:0000172 )
gibberellic acid sensitivity( TO:0000166 )
leaf senescence( TO:0000249 )
sugar content( TO:0000333 )
leaf color( TO:0000326 )
chlorophyll content( TO:0000495 )
hexose content( TO:0000307 )
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Plant Ontology
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leaf( PO:0025034 )
leaf sheath( PO:0020104 )
4 leaf senescence stage( PO:0001054 )
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Related Strains
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Phenotype images
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Last updated
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Mar 1, 2025
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Update info.