Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol WRKY42
Gene Symbol Synonym OsWRKY42, WRKY-42
CGSNL Gene Name WRKY GENE 42
Gene Name Synonym Rice WRKY gene42, WRKY transcription factor 42
Protein Name TRANSCRIPTION FACTOR WRKY42
Allele
Chromosome No. 2
Explanation BK005045. WRKY50 in Zhang and Wang (2005) and in Berri et al. (2009). WRKY27 in Wu et al. (2005) and Sun et al. 2014. up-regulated after fertilization (Abiko et al. 2013).
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK110587
MSU ID LOC_Os02g26430.1
RAP ID Os02g0462800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Wang X., Bin-Bin Li, Tian-Tian Ma, Liang-Yu Sun, Tai L., Chun-Hong Hu, Wen-Ting Liu, Wen-Qiang Li, Kun-Ming Chen
BMC Plant Biol. 2020  20(1)  11
The NAD kinase osnadk1 affects the intracellular redox balance and enhances the tolerance of rice to drought.
Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019  100(1-2)  133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018  18(1)  264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
Choi N.Y., Lee E., Lee S.G., Choi C.H., Park S.R., Ahn I., Bae S.C., Hwang C.H., Hwang D.J.
Front Plant Sci 2017  8  1628
Genome-Wide Expression Profiling of OsWRKY Superfamily Genes during Infection with Xanthomonas oryzae pv. oryzae Using Real-Time PCR.
Yang X., Gong P., Li K., Huang F., Cheng F., Pan G.
J. Exp. Bot. 2016  67(9)  2761-76
A single cytosine deletion in the OsPLS1 gene encoding vacuolar-type H+-ATPase subunit A1 leads to premature leaf senescence and seed dormancy in rice.
Sakuraba Y., Han S.H., Yang H.J., Piao W., Paek N.C.
Plant Mol. Biol. 2016  92(1-2)  223-34
Mutation of Rice EARLY FLOWERING3.1 (OsELF3.1) delays leaf senescence in rice.
Han M., Kim C.Y., Lee J., Lee S.K., Jeon J.S.
Mol. Cells 2014  37(7)  532-9
OsWRKY42 represses OsMT1d and induces reactive oxygen species and leaf senescence in rice.
Sun L.J.a, Huang L.b, Li D.Y.b, Zhang H.J.b, Song F.M.b
Zhiwu Shengli Xuebao/Plant Physiology Journal 2014  50  1651-1658
Comprehensive expression analysis suggests overlapping of rice OsWRKY transcription factor genes during abiotic stress responses
Nuruzzaman M., Sharoni A.M., Satoh K., Kumar A., Leung H., Kikuchi S.
J. Plant Physiol. 2014  171(1)  2-13
Comparative transcriptome profiles of the WRKY gene family under control, hormone-treated, and drought conditions in near-isogenic rice lines reveal differential, tissue specific gene activation.
Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013  64(7)  1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
Rice WRKY Working Group
Rice (N Y) 2012  5  3
Nomenclature report on rice WRKYs. -Conflict regarding gene names and its solution
Berri S,Abbruscato P,Faivre-Rampant O,Brasileiro AC,Fumasoni I,Satoh K,Kikuchi S,Mizzi L,Morandini P,Pe ME,Piffanelli P
BMC Plant Biol 2009  9  120
Characterization of WRKY co-regulatory networks in rice and Arabidopsis.
Christian A. Ross Yue Liu Qingxi J. Shen
Journal of integrative plant biology 2007  49(6)  827-842
The WRKY Gene Family in Rice (Oryza sativa)
Ryu,H.S., Han,M., Lee,S.K., Cho,J.I., Ryoo,N., Heu,S., Lee,Y.H., Bhoo,S.H., Wang,G.L., Hahn,T.R. and Jeon,J.S.
Plant Cell Rep. 2006  25(8)  836-847
A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response.
Kun-Lu Wu, Ze-Jian Guo, Hai-Hua Wang, Li J.
DNA research : an international journal for rapid publication of reports on genes and genomes 2005  12(1)  9-26
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
Xie Z, Zhang ZL, Zou X, Huang J, Ruas P, Thompson D, Shen QJ.
Plant Physiol. 2005  137 (1)  176-189
Annotations and Functional Analyses of the Rice WRKY Gene Superfamily Reveal Positive and Negative Regulators of Abscisic Acid Signaling in Aleurone Cells
Zhang Y., Wang L.
BMC evolutionary biology 2005  5  1
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
Zhang,Z.L., Xie,Z., Zou,X., Casaretto,J., Ho,T.H. and Shen,Q.J.
Plant Physiol. 2004  134 (4)  1500-1513
A Rice WRKY Gene Encodes a Transcriptional Repressor of the Gibberellin Signaling Pathway in Aleurone Cells
Qiu,Y., Jing,S., Fu,J., Li,L. and Yu,D.
Chin. Sci. Bull. 2004  49  2159-2168
Cloning and analysis of expression profile of 13 WRKY genes in rice
TextPresso Search Search textpresso for WRKY42 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology sequence-specific DNA binding( GO:0043565 )
defense response( GO:0006952 )
transcription factor activity( GO:0003700 )
response to water deprivation( GO:0009414 )
response to abscisic acid stimulus( GO:0009737 )
response to salicylic acid stimulus( GO:0009751 )
leaf senescence( GO:0010150 )
response to heat( GO:0009408 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
response to jasmonic acid stimulus( GO:0009753 )
embryonic development( GO:0009790 )
defense response to bacterium( GO:0042742 )
Trait Ontology abscisic acid sensitivity( TO:0000615 )
plant growth hormone sensitivity( TO:0000401 )
jasmonic acid sensitivity( TO:0000172 )
drought sensitivity( TO:0000188 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
heat tolerance( TO:0000259 )
leaf senescence( TO:0000249 )
bacterial blight disease resistance( TO:0000175 )
Plant Ontology 4 leaf senescence stage( PO:0001054 )
Related Strains
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Phenotype images
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Last updated
Apr 15, 2020


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