Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GLUP4
Gene Symbol Synonym glup4(esp8), esp8, glup4, OsRab5B2, Rab5a, OsRab5a, gpa1, GPA1/Rab5a, GPA, GLUP4/Rab5, GLUP4/Rab5a
CGSNL Gene Name GLUTELIN PRECURSOR 4
Gene Name Synonym glutelin precursor4, glutelin precursor 4, glutelin precursor-4, small GTP-binding protein OsRab5B2, small GTP-binding protein OsRab5a, glutelin precursor mutant4, glutelin precursor accumulation 1
Protein Name GLUTELIN PRECURSOR 4
Allele gpa1, glup4/rab5a, glup4, rab5a
Chromosome No. 12
Explanation High content of 57kDa polypeptide (glutelin precursor polypeptide) with low content of 40kDa and 20kDa polypeptides. This gene is located on chromosome 12 in 5.9cM interval between PCR markers L714 and C901. PO:0009010; seed. AY029301.
Trait Class Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK061116
MSU ID LOC_Os12g43550.1
LOC_Os12g43550.2
RAP ID Os12g0631100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Tian L., Doroshenk K.A., Zhang L., Fukuda M., Washida H., Kumamaru T., Okita T.
Plant Cell 2020  32(8)  2566-2581
Zipcode RNA-Binding Proteins and Membrane Trafficking Proteins Cooperate to Transport Glutelin mRNAs in Rice Endosperm.
Ren Y., Wang Y., Pan T., Wang Y., Wang Y., Gan L., Wei Z., Wang F., Wu M., Jing R., Wang J., Wan G., Bao X., Zhang B., Zhang P., Zhang Y., Ji Y., Lei C., Zhang X., Cheng Z., Lin Q., Zhu S., Zhao Z., Wang J., Wu C., Qiu L., Wang H., Wan J.
Plant Cell 2020  32(3)  758-777
<i>GPA5</i> Encodes a Rab5a Effector Required for Post-Golgi Trafficking of Rice Storage Proteins.
Chu T.T.H., Hoang T.G., Trinh D.C., Bureau C., Meynard D., Vernet A., Ingouff M., Do N.V., Périn C., Guiderdoni E., Gantet P., Maurel C., Luu D.T.
Rice (N Y) 2018  11(1)  23
Sub-cellular markers highlight intracellular dynamics of membrane proteins in response to abiotic treatments in rice.
Huang X., Lu Z., Wang X., Ouyang Y., Chen W., Xie K., Wang D., Luo M., Luo J., Yao J.
Plant J. 2016   
Imprinted gene OsFIE1 modulates rice seed development by influencing nutrient metabolism and modifying genome H3K27me3.
Wen L., Fukuda M., Sunada M., Ishino S., Ishino Y., Okita T.W., Ogawa M., Ueda T., Kumamaru T.
J. Exp. Bot. 2015   
guanine nucleotide exchange factor 2 for Rab5 proteins coordinated with GLUP6/GEF regulates the intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm.
Ren Y.a b, Wang Y.a, Liu F.a, Zhou K.a, Ding Y.c, Zhou F.a, Wang Y.b, Liu K.a, Gan L.b, Ma W.b, Han X.a, Zhang X.b, Guo X.b, Wu F.b, Cheng Z.b, Wang J.b, Lei C.b, Lin Q.b, Jiang L.a, Wu C.b, Bao Y.d, Wang H.b, Wan J.a b
Plant Cell 2014  26  410-425
glutelin precursor ACCUMULATION3 encodes a regulator of post-golgi vesicular traffic essential for vacuolar protein sorting in rice endosperm
Fukuda M., Wen L., Satoh-Cruz M., Kawagoe Y., Nagamura Y., Okita T.W., Washida H., Sugino A., Ishino Y., Ishino S., Ogawa M., Sunada M., Ueda T., Kumamaru T.
Plant Physiol. 2013  162(2)  663-74
A guanine nucleotide exchange factor for Rab5 proteins is essential for intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm.
Liu F., Ren Y., Wang Y., Peng C., Zhou K., Lv J., Guo X., Zhang X., Zhong M., Zhao S., Jiang L., Wang H., Bao Y., Wan J.
Mol Plant 2013  6(6)  1918-32
OsVPS9A functions cooperatively with OsRAB5A to regulate post-Golgi dense vesicle-mediated storage protein trafficking to the protein storage vacuole in rice endosperm cells.
Pitakrattananukool S., Kawakatsu T., Anuntalabhochai S., Takaiwa F.
Biosci. Biotechnol. Biochem. 2012  76(7)  1296-302
Overexpression of <i>OsRab7B3</i>, a Small GTP-Binding Protein Gene, Enhances leaf senescence in Transgenic Rice.
Fukuda M., Satoh-Cruz M., Wen L., Crofts A.J., Sugino A., Washida H., Okita T.W., Ogawa M., Kawagoe Y., Maeshima M., Kumamaru T.
Plant Physiol. 2011  157(2)  632-44
The small GTPase Rab5a is essential for intracellular transport of proglutelin from the Golgi apparatus to the protein storage vacuole and endosomal membrane organization in developing rice endosperm.
Wang Y., Ren Y., Liu X., Jiang L., Chen L., Han X., Jin M., Liu S., Liu F., Lv J., Zhou K., Su N., Bao Y., Wan J.
Plant J. 2010  64(5)  812-824
OsRab5a regulates endomembrane organization and storage protein trafficking in rice endosperm cells.
Rho,H.S., Heo,J.B., Bang,W.Y., Hwang,S.M., Nahm,M.Y., Kwon,H.J., Kim,S.W., Lee,B.H. and Bahk,J.D.
Plant Sci. 2009  177(5)  411-417
The role of OsPRA1 in vacuolar trafficking by OsRab GTPases in plant system
Sato, M., T. Takemoto, T. Kumamaru, H. Satoh
RGN 2003  20  42-43
Mapping of glup4 gene for highly accumulatinig glutelin precursor polypeptides in rice.
Wang,X.B., Xia,M., Chen,Q., Wu,Z. and Wu,P.
Plant Sci. 2002  163(2)  273-280
Identification of a new small GTP-binding protein gene OsRab5a, genomic organization, and expression pattern analysis during nitrate supply and early nutrient starvation in rice (Oryza sativa L.) root
Satoh, H., W.X. Li, Y. Takemoto, T. Ito, T. Kumamaru, L.Q. Qu and M. Ogawa
RGN 1999  16  98-100.
gulp4 controlling a 57H character was located on chromosome 12 in rice.
Ohtsuka, R., M. Yoshii, Y. Takemoto, H. Satoh and M. Ogawa
Breeding Science 1997  47(Suppl. 1)  312
Intracellular distribution of 57kDa polypeptides in 57H mutants of rice (Oryza sativa L. ).
Kinoshita, T.
RGN 1995  12  9-24
I. New gene symbols registered.
Itoh, T., H. Satoh and M.Y. Son
Japan. J. Breed. 1993  43(Suppl. 2)  103
Gene analysis of mutants for 57kDa polypeptides of seed storage proteins in rice.
TextPresso Search Search textpresso for GLUP4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060414
Ontologies
Gene Ontology endosome transport( GO:0016197 )
cytoplasm( GO:0005737 )
mRNA transport( GO:0051028 )
GTP binding( GO:0005525 )
small GTPase mediated signal transduction( GO:0007264 )
endosome( GO:0005768 )
plasma membrane( GO:0005886 )
protein transport( GO:0015031 )
nutrient reservoir activity( GO:0045735 )
response to salt stress( GO:0009651 )
response to osmotic stress( GO:0006970 )
cytoplasmic transport( GO:0016482 )
Trait Ontology protein composition related trait( TO:0000490 )
endosperm storage protein-2 content( TO:0000109 )
salt tolerance( TO:0006001 )
osmotic response sensitivity( TO:0000095 )
Plant Ontology seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Sep 1, 2020


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