Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GL1
Gene Symbol Synonym gl1, NUDA/GL-1, NUDA/GL1, NUDA, GL-1, OsWOX3B, OsWOX2, OsWOX3, Os WOX3, WOX3B, WOX2, WOX3
Gene Name Synonym glabrous leaf and hull1, glabrous leaf and hull 1, glabrous leaf and hull-1, WUSCHEL-related homeobox 3B
Protein Name
Allele gl1-1, gl1-2, gl1-3, gl1-4
Chromosome No. 5
Explanation LOC_Os05g02730. duplicate gene. Glabrous leaf and floral glumes with no pubescence. [298] PO:0009038; palea ; PO:0020039; leaf lamina ; PO:0009037; lemma. The gl1 gene is located between SSR markers RM1200/RM17786 and RM2010/RM17801 on chromosome 5. OsWOX2 in Dai et al. 2007. OsWOX3B in Zhang et al. 2012, Sun et al. 2017. OsWOX3 in Ohmoriet al. 2013, Bakshi et al. 2017. Q5W7C3, A2XZR3. AM490244. GO:2000039: regulation of trichome morphogenesis. TO:0000748: leaf morphology trait.
Trait Class Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AM490244
MSU ID LOC_Os05g02730.1
RAP ID Os05g0118700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018  8(1)  14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
Sun W., Gao D., Xiong Y., Tang X., Xiao X., Wang C., Yu S.
Mol Plant 2017  10(11)  1417-1433
Hairy Leaf 6, an AP2/ERF Transcription Factor, Interacts with OsWOX3B and Regulates Trichome Formation in Rice.
Bakshi A., Moin M., Datla R., Kirti P.B.
Plant Signal Behav 2017    0
Expression Profiling of Development Related Genes in Rice Plants Ectopically Expressing AtTOR.
Ohmori Y., Tanaka W., Kojima M., Sakakibara H., Hirano H.Y.
Plant Cell 2013  25(1)  229-41
WUSCHEL-RELATED HOMEOBOX4 is involved in meristem maintenance and is negatively regulated by the CLE gene FCP1 in rice.
Zhang H., Wu K., Wang Y., Peng Y., Hu F., Wen L., Han B., Qian Q., Teng S.
Rice (N Y) 2012  5  30
A WUSCHEL-like homeobox gene, OsWOX3B responses to NUDA/GL-1 locus in rice
Li W., Wu J., Weng S., Zhang D., Zhang Y., Shi C.
Plant Cell Rep. 2010  29(6)  617-27
Characterization and fine mapping of the glabrous leaf and hull mutants (gl1) in rice (Oryza sativa L.).
Nardmann,J., Zimmermann,R., Durantini,D., Kranz,E. and Werr,W.
Mol. Biol. Evol. 2007  24(11)  2474-2484
WOX Gene Phylogeny in Poaceae: A Comparative Approach Addressing Leaf and Embryo Development
Zhou, Dao-Xiu
Plant Physiol. 2007  144(1)  380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
Kobayashi, K., R. Ishikawa, M. Senda, S. Akada, T. Harada and M. Niizeki
RGN 1997  14  53-55.
Six glabrous phenotypes of rice classified with a scanning electron microscope.
Yamamoto, T., A. Nishikawa, Y. Nakajima, K. Oeda and H. Hirohara
Breeding Science 1997  47  1-6.
Genetic and morphological studies on glabrousness of a somaclonal variant induced by anther culture in rice (Oryza sativa L.).
Yu, Z.H., S.R. McCouch, T. Kinoshita, S. Sato and S.D. Tanksley
Genome 1995  38  566-574.
Association of morphological and RFLP markers in rice (Oryza sativa L. ).
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Yu, Z.H., T. Kinoshita, S. Sato and S.D. Tanksley
RGN 1992  9  116-118.
Morphological and RFLP markers are associated in rice.
Yoshimura, A., O. Ideta, S. Takebayashi, T. Matsumoto, S. Yoshimura, T. Ogawa and N. Iwata
Japan. J. Breed. 1992  42(Suppl. 2)  124-125.
Integration of RFLP and conventional maps in rice. II. The location of gl-1 and xa-5.
Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984    187-274.
Gene analysis and linkage map.
Sato, S., K. Muraoka and Y. Sano
Japan. J. Breed. 1982  32(3)  232-238.
Reconstruction of a linkage group corresponding to the Nishimura's second chromosome in rice, Oryza sativa L.
Takahashi, M.
In Proceed. Symp. Rice Genet. Cytogenet., Internatl. Rice Res. Inst. (1963). Elsevier, Amsterdam. 1964    215-236.
Linkage groups and gene schemes of some striking morphological characters in Japanese rice.
Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963  53(1)  72-130.
Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).
Nagao, S.
Adv. Genet. 1951  4  181-212.
Genic analysis and linkage relationship of characters in rice.
TextPresso Search Search textpresso for GL1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060368
Gene Ontology cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
multicellular organismal development( GO:0007275 )
transcription, DNA-dependent( GO:0006351 )
trichome morphogenesis( GO:0010090 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
Trait Ontology palea pubescence( )
lemma and palea pubescence( TO:0000417 )
leaf lamina pubescence( TO:0000055 )
Plant Ontology lemma( PO:0009037 )
palea( PO:0009038 )
leaf lamina( PO:0020039 )
Related Strains
Stocks for Genes 1
F Lines 2
Phenotype images
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Photo from A. Yoshimura
Last updated
Jun 15, 2019