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Basic Information
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CGSNL Gene Symbol
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GL1
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Gene Symbol Synonym
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gl1, NUDA/GL-1, NUDA/GL1, NUDA, GL-1, OsWOX3B, OsWOX2, OsWOX3, Os WOX3, WOX3B, WOX2, WOX3, LSY1, OsLSY1, DEP, OsDEP
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CGSNL Gene Name
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GLABROUS LEAF AND HULL 1
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Gene Name Synonym
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glabrous leaf and hull1, glabrous leaf and hull 1, glabrous leaf and hull-1, WUSCHEL-related homeobox 3B, leaf lateral symmetry-1, LEAF LATERAL SYMMETRY1, DEPILOUS
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Protein Name
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Allele
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gl1-1, gl1-2, gl1-3, gl1-4, lsy1
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Chromosome No.
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5
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Explanation
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duplicate gene. Glabrous leaf and floral glumes with no pubescence. [298] The gl1 gene is located between SSR markers RM1200/RM17786 and RM2010/RM17801 on chromosome 5. OsWOX2 in Dai et al. 2007. OsWOX3B in Zhang et al. 2012, Sun et al. 2017. OsWOX3 in Ohmoriet al. 2013, Bakshi et al. 2017. Q5W7C3, A2XZR3. AM490244. GO:2000039: regulation of trichome morphogenesis. TO:0000748: leaf morphology trait. lsy1 mutant showed two major phenotypes of leaves; a narrow leaf due to the deletion of a part or whole of one lateral half, and a bifurcated leaf in which an additional midrib is formed in one lateral half. Homozygous lys1 plants were sterile. GO:0099402: plant organ development.
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Trait Class
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Vegetative organ - Leaf
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AM490244
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MSU ID
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LOC_Os05g02730.1
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RAP ID
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Os05g0118700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhang T., You J., Zhang Y., Yao W., Chen W., Duan Q., Xiao W., Ye L., Zhou Y., Sang X., Ling Y., He G., Li Y.
New Phytol. 2021
lf1 regulates the lateral organs polarity development in rice.
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He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018 8(1) 14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
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Bakshi A., Moin M., Datla R., Kirti P.B.
Plant Signal Behav 2017 0
Expression Profiling of Development Related Genes in Rice Plants Ectopically Expressing AtTOR.
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Sun W., Gao D., Xiong Y., Tang X., Xiao X., Wang C., Yu S.
Mol Plant 2017 10(11) 1417-1433
Hairy Leaf 6, an AP2/ERF Transcription Factor, Interacts with OsWOX3B and Regulates Trichome Formation in Rice.
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Ohmori Y., Tanaka W., Kojima M., Sakakibara H., Hirano H.Y.
Plant Cell 2013 25(1) 229-41
WUSCHEL-RELATED HOMEOBOX4 is involved in meristem maintenance and is negatively regulated by the CLE gene FCP1 in rice.
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Zhang H., Wu K., Wang Y., Peng Y., Hu F., Wen L., Han B., Qian Q., Teng S.
Rice (N Y) 2012 5 30
A WUSCHEL-like homeobox gene, OsWOX3B responses to NUDA/GL-1 locus in rice
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Li W., Wu J., Weng S., Zhang D., Zhang Y., Shi C.
Plant Cell Rep. 2010 29(6) 617-27
Characterization and fine mapping of the glabrous leaf and hull mutants (gl1) in rice (Oryza sativa L.).
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Nardmann,J., Zimmermann,R., Durantini,D., Kranz,E. and Werr,W.
Mol. Biol. Evol. 2007 24(11) 2474-2484
WOX Gene Phylogeny in Poaceae: A Comparative Approach Addressing Leaf and Embryo Development
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Zhou, Dao-Xiu
Plant Physiol. 2007 144(1) 380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
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Obara, M., Ikeda, K., Itoh, J.-I. and Nagato, Y.
Breeding Science 2004 54 157-163
Characterization of leaf lateral symmetry 1 Mutant in Rice.
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Yamamoto, T., A. Nishikawa, Y. Nakajima, K. Oeda and H. Hirohara
Breeding Science 1997 47 1-6.
Genetic and morphological studies on glabrousness of a somaclonal variant induced by anther culture in rice (Oryza sativa L.).
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Kobayashi, K., R. Ishikawa, M. Senda, S. Akada, T. Harada and M. Niizeki
RGN 1997 14 53-55.
Six glabrous phenotypes of rice classified with a scanning electron microscope.
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Yu, Z.H., S.R. McCouch, T. Kinoshita, S. Sato and S.D. Tanksley
Genome 1995 38 566-574.
Association of morphological and RFLP markers in rice (Oryza sativa L. ).
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Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
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Yu, Z.H., T. Kinoshita, S. Sato and S.D. Tanksley
RGN 1992 9 116-118.
Morphological and RFLP markers are associated in rice.
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Yoshimura, A., O. Ideta, S. Takebayashi, T. Matsumoto, S. Yoshimura, T. Ogawa and N. Iwata
Japan. J. Breed. 1992 42(Suppl. 2) 124-125.
Integration of RFLP and conventional maps in rice. II. The location of gl-1 and xa-5.
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Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984 187-274.
Gene analysis and linkage map.
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Sato, S., K. Muraoka and Y. Sano
Japan. J. Breed. 1982 32(3) 232-238.
Reconstruction of a linkage group corresponding to the Nishimura's second chromosome in rice, Oryza sativa L.
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Takahashi, M.
In Proceed. Symp. Rice Genet. Cytogenet., Internatl. Rice Res. Inst. (1963). Elsevier, Amsterdam. 1964 215-236.
Linkage groups and gene schemes of some striking morphological characters in Japanese rice.
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Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963 53(1) 72-130.
Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).
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Nagao, S.
Adv. Genet. 1951 4 181-212.
Genic analysis and linkage relationship of characters in rice.
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DB Reference
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Gramene ID
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GR:0060368
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Ontologies
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Gene Ontology
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cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
multicellular organismal development( GO:0007275 )
transcription, DNA-dependent( GO:0006351 )
leaf development( GO:0048366 )
adaxial/abaxial pattern formation( GO:0009955 )
regulation of cyclin-dependent protein kinase activity( GO:0000079 )
nucleus( GO:0005634 )
transcription factor activity( GO:0003700 )
trichome morphogenesis( GO:0010090 )
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Trait Ontology
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palea pubescence( )
lemma and palea pubescence( TO:0000417 )
leaf lamina pubescence( TO:0000055 )
leaf shape( TO:0000492 )
female sterility( TO:0000358 )
leaf development trait( TO:0000655 )
leaf width( TO:0000370 )
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Plant Ontology
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lemma( PO:0009037 )
palea( PO:0009038 )
leaf lamina( PO:0020039 )
gynoecium( PO:0009062 )
vascular leaf( PO:0009025 )
leaf development stage( PO:0001050 )
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Related Strains
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Stocks for Genes
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1
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F Lines
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2
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Phenotype images
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Click to full size image in new window
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Photo from
A. Yoshimura
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Last updated
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Jan 13, 2022
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Update info.