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Basic Information
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CGSNL Gene Symbol
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UDT1
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Gene Symbol Synonym
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Udt1, bHLH164, OsUDT1, OsbHLH164
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CGSNL Gene Name
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UNDEVELOPED TAPETUM 1
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Gene Name Synonym
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Undeveloped tapetum-1, undeveloped Tapetum1, undeveloped Tapetum 1, undeveloped tapetum 1, UDT1 protein, basic helix-loop-helix protein 164
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Protein Name
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UDT1 PROTEIN
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Allele
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udt1-1, udt1-2, udt1
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Chromosome No.
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7
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Explanation
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AY953870, AAX55226. basic helix loop helix protein; major regulator of early tapetum development. GRO:0007212; stamen stage ST5 ; GRO:0007149; 5.1-early booting stage ; GRO:0007047; 02-seedling ; GRO:0007216; 1.1-dry seed.
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Trait Class
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Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK242516
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MSU ID
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LOC_Os07g36460.1
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RAP ID
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Os07g0549600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Kamara N., Jiao Y., Huang W., Cao L., Zhu L., Zhao C., Huang X., Shivute F.N., Liu X., Wu J., Shahid M.Q.
Front Plant Sci 2023 14 1229870
Comparative cytological and transcriptome analyses of <i>ny2</i> mutant delayed degeneration of tapetal cells and promotes abnormal microspore development in neo-tetraploid rice.
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Han Y., Zhou S.D., Fan J.J., Zhou L., Shi Q.S., Zhang Y.F., Liu X.L., Chen X., Zhu J., Yang Z.N.
Rice (N Y) 2021 14(1) 4
OsMS188 Is a Key Regulator of Tapetum Development and Sporopollenin Synthesis in Rice.
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Xu Y., Wang R., Wang Y., Zhang L., Yao S.
Plant Cell Environ. 2020 43(4) 992-1007
A point mutation in ltt1 enhances cold tolerance at the booting stage in rice.
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Xie X., Zhang Z., Zhao Z., Xie Y., Li H., Ma X., Liu Y.G., Chen L.
J. Exp. Bot. 2020 71(9) 2551-2560
The mitochondrial aldehyde dehydrogenase OsALDH2b negatively regulates tapetum degeneration in rice.
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Zhao J., Long T., Wang Y., Tong X., Tang J., Li J., Wang H., Tang L., Li Z., Shu Y., Liu X., Li S., Liu H., Li J., Wu Y., Zhang J.
Plant Physiol. 2020 182(4) 2047-2064
<i>RMS2</i> Encoding a GDSL Lipase Mediates Lipid Homeostasis in Anthers to Determine Rice Male Fertility.
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Chen L., Deng R., Liu G., Jin J., Wu J., Liu X.
BMC Plant Biol. 2019 19(1) 546
Cytological and transcriptome analyses reveal OsPUB73 defect affects the gene expression associated with tapetum or pollen exine abnormality in rice.
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Ko S.S., Li M.J., Lin Y.J., Hsing H.X., Yang T.T., Chen T.K., Jhong C.M., Ku M.S.
Front Plant Sci 2017 8 1258
Tightly Controlled Expression of bHLH142 Is Essential for Timely Tapetal Programmed Cell Death and pollen Development in Rice.
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Lin H., Yu J., Pearce S.P., Zhang D., Wilson Z.A.
Plant J. 2017 92(6) 1076-1091
RiceAntherNet: a gene co-expression network for identifying anther and pollen development genes.
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Pu C.X., Han Y.F., Zhu S., Song F.Y., Zhao Y., Wang C.Y., Zhang Y.C., Yang Q., Wang J., Bu S.L., Sun L.J., Zhang S.W., Zhang S.Q., Sun D.Y., Sun Y.
Plant Cell 2017 29(1) 70-89
The Rice Receptor-Like Kinases DWARF AND RUNTISH SPIKELET1 and 2 Repress Cell Death and Affect Sugar Utilization during Reproductive Development.
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Huang C.K., Sie Y.S., Chen Y.F., Huang T.S., Lu C.A.
BMC Plant Biol. 2016 16(1) 84
Two highly similar DEAD box proteins, OsRH2 and OsRH34, homologous to eukaryotic initiation factor 4AIII, play roles of the exon junction complex in regulating growth and development in rice.
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Chang Z., Chen Z., Yan W., Xie G., Lu J., Wang N., Lu Q., Yao N., Yang G., Xia J., Tang X.
Plant Sci. 2016 253 21-30
An ABC transporter, OsABCG26, is required for anther cuticle and pollen exine formation and pollen-pistil interactions in rice.
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Cao H., Li X., Wang Z., Ding M., Sun Y., Dong F., Chen F., Liu L., Doughty J., Li Y., Liu Y.X.
Plant Physiol. 2015 168(4) 1389-405
histone H2B Monoubiquitination Mediated by HISTONE MONOUBIQUITINATION1 and HISTONE MONOUBIQUITINATION2 Is Involved in Anther Development by Regulating Tapetum Degradation-Related Genes in Rice.
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Marathi B., Jena K.K.
Euphytica 2014 201 1-14
Floral traits to enhance outcrossing for higher hybrid seed production in rice: present status and future prospects
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Ko S.S., Li M.J., Sun-Ben Ku M., Ho Y.C., Lin Y.J., Chuang M.H., Hsing H.X., Lien Y.C., Yang H.T., Chang H.C., Chan M.T.
Plant Cell 2014 26(6) 2486-2504
The bHLH142 Transcription Factor Coordinates with TDR1 to Modulate the Expression of EAT1 and Regulate pollen Development in Rice.
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Gong P., He C.
Plant Physiol. 2014 165(3) 1047-1061
Uncovering Divergence of Rice Exon Junction Complex Core Heterodimer Gene Duplication Reveals Their Essential Role in Growth, Development, and Reproduction.
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Fu Z., Yu J., Cheng X., Zong X., Xu J., Chen M., Li Z., Zhang D., Liang W.
Plant Cell 2014 26(4) 1512-1524
The Rice Basic Helix-Loop-Helix Transcription Factor TDR INTERACTING PROTEIN2 Is a Central Switch in Early Anther Development.
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Niu N., Liang W., Yang X., Jin W., Wilson Z.A., Hu J., Zhang D.
Nat Commun 2013 4 1445
EAT1 promotes tapetal cell death by regulating aspartic proteases during male reproductive development in rice.
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Tan H., Liang W., Hu J., Zhang D.
Dev. Cell 2012 22(6) 1127-37
MTR1 Encodes a Secretory fasciclin glycoprotein Required for Male Reproductive Development in Rice.
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Yi J., Kim S.R., Lee D.Y., Moon S., Lee Y.S., Jung K.H., Hwang I., An G.
Plant J. 2012 70(2) 256-70
The rice gene, DEFECTIVE TAPETUM AND MEIOCYTES 1 (DTM1), is required for early tapetum development and meiosis.
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Liu Z., Bao W., Liang W., Yin J., Zhang D.
J Integr Plant Biol 2010 52(7) 670-8
Identification of GAMYB-4 and analysis of the regulatory role of GAMYB in rice anther development.
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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Jung,K.H., Han,M.J., Lee,Y.S., Kim,Y.W., Hwang,I., Kim,M.J., Kim,Y.K., Nahm,B.H. and An,G.
Plant Cell 2005 17(10) 2705-2722
Rice undeveloped tapetum1 is a major regulator of early tapetum development.
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DB Reference
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Gramene ID
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GR:0080007
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Ontologies
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Gene Ontology
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nucleus( GO:0005634 )
transcription regulator activity( GO:0030528 )
regulation of transcription( GO:0045449 )
tapetal layer formation( GO:0048656 )
tapetal layer development( GO:0048658 )
pollen development( GO:0009555 )
stamen development( GO:0048443 )
anther development( GO:0048653 )
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Trait Ontology
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pollen free( TO:0000245 )
stamen anatomy and morphology trait( TO:0000215 )
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Plant Ontology
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tetrad of microspores( PO:0000032 )
anther wall middle layer( PO:0004700 )
anther wall tapetum( PO:0009071 )
spikelet( PO:0009051 )
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Related Strains
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Phenotype images
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Last updated
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Nov 20, 2023
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