Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TGW6
Gene Symbol Synonym tgw6, OsSTRL7, STRL7
CGSNL Gene Name TOTAL GRAIN WEIGHT6
Gene Name Synonym total grain weight6, THOUSAND-GRAIN WEIGHT 6, STR-like 7
Protein Name INDOLE-3-ACETIC ACID (IAA)-GLUCOSE HYDROLASE
Allele TGW6(Kasalath), tgw6(Nipponbare), TGW6-Kasalath
Chromosome No. 6
Explanation TGW6 encodes a novel protein with indole-3-acetic acid (IAA)-glucose hydrolase activity. AB513135. The Kasalath allele contained six nucleotide substitutions and a 1-bp deletion at nucleotide 313 compared to the Nipponbare allele. Nipponbare TGW6 protein hydrolyzed IAA-glucose into IAA and glucose, but Kasalath TGW6 did not. (Ishimaru et al.)
Trait Class Biochemical character
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os06g41850.1
RAP ID Os06g0623700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Ma X., Feng F., Zhang Y., Elesawi I.E., Xu K., Li T., Mei H., Liu H., Gao N., Chen C., Luo L., Yu S.
PLoS Genet. 2019  15(5)  e1008191
A novel rice grain size.gene OsSNB was identified by genome-wide association study in natural population.
Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018  9(6) 
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
Zou T., Li S., Liu M., Wang T., Xiao Q., Chen D., Li Q., Liang Y., Zhu J., Liang Y., Deng Q., Wang S., Zheng A., Wang L., Li P.
Sci Rep 2017  7(1)  6863
An atypical strictosidine synthase, OsSTRL2, plays key roles in anther development and pollen wall formation in rice.
Kim S.R., Ramos J., Ashikari M., Virk P.S., Torres E.A., Nissila E., Hechanova S.L., Mauleon R., Jena K.K.
Rice (N Y) 2016  9(1)  12
Development and validation of allele-specific SNP/indel markers for eight yield-enhancing genes using whole-genome sequencing strategy to increase yield potential of rice, Oryza sativa L.
Ishimaru K., Hirotsu N., Madoka Y., Murakami N., Hara N., Onodera H., Kashiwagi T., Ujiie K., Shimizu B.I., Onishi A., Miyagawa H., Katoh E.
Nat. Genet. 2013  45(6)  707-11
Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield.
Ishimaru K.
Plant Physiol. 2003  133(3)  1083-1090
Identification of a locus increasing rice yield and physiological analysis of its function.
TextPresso Search Search textpresso for TGW6 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology hydrolase activity, acting on ester bonds( GO:0016788 )
strictosidine synthase activity( GO:0016844 )
biosynthetic process( GO:0009058 )
endoplasmic reticulum( GO:0005783 )
membrane( GO:0016020 )
indoleacetic acid metabolic process( GO:0009683 )
Trait Ontology grain weight( TO:0000590 )
grain length( TO:0000734 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 15, 2020


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