Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol EM
Gene Symbol Synonym Em*, EMP1, Emp1, EM, Em, OsEm, Osem, OsLEA21, OsEm1, Em1
Gene Name Synonym ABA regulated gene, ABA-regulated gene, Embryonic abundant protein 1, Em protein, Early methionine labelled polypeptide, Abscisic acid induced protein, Embryogenic protein, late embryogenesis abundant protein 21
Chromosome No. 5
Explanation expressed late in embryogenesis. P46520. OSEM is one of rice LEA genes and is activated by OSVP1 and ABA. U22102. X63126. OSU22102. a group I LEA protein. GO:2000070: regulation of response to water deprivation.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression embryo - Em8 - Enlargement of organs
cDNA Accession No. AK063677
MSU ID LOC_Os05g28210.1
RAP ID Os05g0349800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Yoshida H., Hirano K., Yano K., Wang F., Mori M., Kawamura M., Koketsu E., Hattori M., Ordonio R.L., Huang P., Yamamoto E., Matsuoka M.
Nat Commun 2022  13(1)  5665
Genome-wide association study identifies a gene responsible for temperature-dependent rice germination.
Zhang Y., Du H., Gui Y., Xu F., Liu J., Zhang J., Xu W.
J. Exp. Bot. 2020  71(9)  2740-2751
Moderate water stress in rice induces rhizosheath formation associated with abscisic acid and auxin responses.
Song S., Wang G., Wu H., Fan X., Liang L., Zhao H., Li S., Hu Y., Liu H., Ayaad M., Xing Y.
Plant J. 2020  103(2)  532-546
OsMFT2 is involved in the regulation of ABA signaling-mediated seed germination through interacting with OsbZIP23/66/72 in rice.
Yu J., Lai Y., Wu X., Wu G., Guo C.
Biochem. Biophys. Res. Commun. 2016  478(2)  703-9
Overexpression of OsEm1 encoding a group I LEA protein confers enhanced drought tolerance in rice.
Chen H., Lan H., Huang P., Zhang Y., Yuan X., Huang X., Huang J., Zhang H.
Genet. Mol. Res. 2015  14(4)  11994-2005
Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice.
Zhang C.J., Zhao B.C., Ge W.N., Zhang Y.F., Song Y., Sun D.Y., Guo Y.
Plant Physiol. 2011  157(4)  1884-99
An Apoplastic H-Type Thioredoxin Is Involved in the Stress Response through Regulation of the Apoplastic Reactive Oxygen Species in Rice.
Shobbar ZS,Oane R,Gamuyao R,De Palma J,Malboobi MA,Karimzadeh G,Javaran MJ,Bennett J
New Phytol. 2008  178  68-79
Abscisic acid regulates gene expression in cortical fiber cells and silica cells of rice shoots.
Wang X. S., Zhu H. B., Jin G. L., Liu H. L., Wu W. R., Zhu J.
Plant Science 2007  172  414-420
Genome-scale identification and analysis of LEA genes in rice (Oryza sativa L.)
Miyoshi, K., Y. Kagaya, Y. Ogawa, Y. Nagato and T. Hattori
Plant Cell Physiol. 2002  43  307-313.
Temporal and spatial expression pattern of the OSVP1 and OSEM genes during seed development in rice.
Hattori,T., Terada,T. and Hamasuna,S.
Plant J. 1995  7(6)  913-925
Regulation of the Osem gene by abscisic acid and the transcriptional activator VP1: analysis of cis-acting promoter elements required for regulation by abscisic acid and VP1.
Bostock RM, Quatrano RS.
Plant Physiol. 1992  98(4)  1356-1363
Regulation of Em Gene Expression in Rice : Interaction between Osmotic Stress and Abscisic Acid.
Litts,J.C., Erdman,M.B., Huang,N., Karrer,E.E., Noueiry,A., Quatrano,R.S. and Rodriguez,R.L.
Plant Mol. Biol. 1992  19(2)  335-337
Nucleotide sequence of the rice (Oryza sativa) Em protein gene (Emp1).
Ranjhan, S., J.C. Litts, M.R. Foolad and R.L. Rodriguez
Theor. Appl. Genet. 1991  82  481-488.
Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.).
TextPresso Search Search textpresso for EM ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060291
Gene Ontology abscisic acid mediated signaling( GO:0009738 )
response to water( GO:0009415 )
abscisic acid biosynthetic process( GO:0009688 )
response to abscisic acid stimulus( GO:0009737 )
acquisition of desiccation tolerance( GO:0048700 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
regulation of response to osmotic stress( GO:0047484 )
Trait Ontology cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
abscisic acid sensitivity( TO:0000615 )
osmotic response sensitivity( TO:0000095 )
water stress trait( TO:0000237 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Dec 26, 2022