Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RUBQ2
Gene Symbol Synonym rubq2, rub1, Ubq1, Rubq1, UBQ10
CGSNL Gene Name RICE UBIQUITIN2
Gene Name Synonym rice ubiquitin2, ubiquitin 2, ubiquitin2, Ubiquitin 10
Protein Name RICE UBIQUITIN2
Allele
Chromosome No. 2
Explanation AF484682. AY661468. X76064. U37687. UBQ10 in Jain et al. 2006 and Auler et al. 2017.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK101547
MSU ID LOC_Os02g06640.1
LOC_Os02g06640.3
LOC_Os02g06640.4
RAP ID Os02g0161900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Auler P.A., Benitez L.C., do Amaral MN., Vighi I.L., Rodrigues G.S., da Maia LC., Braga E.J.B.
Genet. Mol. Res. 2017  16(2) 
Selection of candidate reference genes and validation for real-time PCR studies in rice plants exposed to low temperatures.
Jain M, Nijhawan A, Tyagi AK, Khurana JP.
Biochem. Biophys. Res. Commun. 2006  345(2)  646-51
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.
Yang,G., Lee,Y.H., Jiang,Y., Shi,X., Kertbundit,S. and Hall,T.C.
Plant Cell 2005  17(5)  1559-1568
A Two-Edged Role for the Transposable Element Kiddo in the rice ubiquitin2 Promoter
Yang,G., Dong,J., Chandrasekharan,M.B. and Hall,T.C.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2001  266(3)  417-424
Kiddo, a new transposable element family closely associated with rice genes.
Huq,E., Hirayama,L., Hossain,M.A. and Hodges,T.K.
Plant Physiol. 1997  113(1)  305
Characterization of a cDNA Encoding a Polyubiquitin Gene in Rice (Accession No. U37687)(PGR97-004)
Kim,Y.M., Kim,J.K. and Hwang,Y.S.
Plant Physiol. 1994  106(2)  791-792
Isolation and characterization of a rice full-length cDNA clone encoding a polyubiquitin.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 28, 2017

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