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Basic Information
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CGSNL Gene Symbol
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RPS4
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Gene Symbol Synonym
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rps4
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CGSNL Gene Name
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S4 SUBUNIT OF THE MITOCHONDRIAL RIBOSOME
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Gene Name Synonym
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S4 subunit of the mitochondrial ribosome, Ribosomal protein S4
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Protein Name
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S4 SUBUNIT OF THE MITOCHONDRIAL RIBOSOME
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Allele
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Chromosome No.
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Mt
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Explanation
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AF055706. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99369 (cultivar Nipponbare), DQ167807 (isolate PA64S). BA000029: BAC19883 (Nipponbare complete mitochondrial genome). JN861111: AEZ03703, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03703 (indica IR6888 complete mitochondrial genome). The locations of BA000029: BAC19883 (DQ167400: AAZ99369) and JN861111: AEZ03703 (JF281153: AEZ03703) are in conflict.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osm1g00400
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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References
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Zu X., Luo L., Wang Z., Gong J., Yang C., Wang Y., Xu C., Qiao X., Deng X., Song X., Chen C., Tan B.C., Cao X.
Nat Commun 2023 14(1) 6789
A mitochondrial pentatricopeptide repeat protein enhances cold tolerance by modulating mitochondrial superoxide in rice.
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Luo Z., Xiong J., Xia H., Wang L., Hou G., Li Z., Li J., Zhou H., Li T., Luo L.
Front Plant Sci 2022 13 926285
Pentatricopeptide Repeat Gene-Mediated Mitochondrial RNA Editing Impacts on Rice drought tolerance.
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Bentolila,S. and Stefanov,S.
Plant Physiol. 2012 158(2) 996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006 140(2) 401-410
The Rice Mitochondrial Genomes and Their Variations
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Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002 268(4) 434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
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Handa H, Kubo N, Kadowaki K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 1998 258(3) 199-207
Genes for the ribosomal S4 protein encoded in higher plant mitochondria are transcribed, edited, and translated.
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DB Reference
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Gramene ID
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GR:0100156
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Ontologies
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Gene Ontology
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RNA binding( GO:0003723 )
structural constituent of ribosome( GO:0003735 )
mitochondrion( GO:0005739 )
mitochondrial small ribosomal subunit( GO:0005763 )
translation( GO:0006412 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Dec 21, 2023
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Update info.