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Basic Information
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CGSNL Gene Symbol
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RPOC2
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Gene Symbol Synonym
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rpoC2, RPO beta", RPObeta"
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CGSNL Gene Name
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RNA POLYMERASE C2
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Gene Name Synonym
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RNA polymeraseC2, RNA polymerase C2, DNA-directed RNA polymerase beta'' chain, Plastid-encoded RNA polymerase subunit beta'', RNA polymerase subunit beta'', RNA polymerase beta'' chain, RNA polymerase beta' subunit-2, RNA polymerase beta'' subunit, Plastid- encoded RNA polymerase beta'' subunit, RNA polymerase beta'' chain, RNA polymerase beta II subunit
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Protein Name
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RNA POLYMERASE C2
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Allele
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Chromosome No.
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Pt
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Explanation
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LOC_Osp1g00260.PEP. EC=2.7.7.6 P0C507. P0C508(indica). P0C509(japonica). X15901: CAA33988 (Japonica Group chloroplast genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osp1g00260
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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References
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Qiu Z., Wen S., Sun P., Chen D., Wang C., Song X., Xiao L., Zhang P., Zhao D., Wen C., Guan P., Du X., Sun Y., Xu C., Song J.
Plants (Basel) 2025 14(2)
RAS, a Pentatricopeptide Repeat Protein, Interacts with OsTRX z to Regulate Chloroplast Gene Transcription and RNA Processing.
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Qiu Z., Chen D., Teng L., Guan P., Yu G., Zhang P., Song J., Zeng Q., Zhu L.
Rice (N Y) 2022 15(1) 50
OsWHY1 Interacts with OsTRX z and is Essential for Early Chloroplast Development in Rice.
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Huang W., Zhang Y., Shen L., Fang Q., Liu Q., Gong C., Zhang C., Zhou Y., Mao C., Zhu Y., Zhang J., Chen H., Zhang Y., Lin Y., Bock R., Zhou F.
New Phytol. 2020
Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice.
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Liu H., Ren D., Jiang L., Li X., Yao Y., Mi L., Chen W., Mo A., Jiang N., Yang J., Chen P., Ma H., Luo X., Lu P.
Plant Cell 2020
A Natural Variation in PLEIOTROPIC DEVELOPMENTAL DEFECTS Uncovers a Crucial Role for Chloroplast tRNA Modification in Translation and Plant Development.
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Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019 20(18)
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
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Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018 9 782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
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Qiu Z., Chen D., He L., Zhang S., Yang Z., Zhang Y., Wang Z., Ren D., Qian Q., Guo L., Zhu L.
Rice (N Y) 2018 11(1) 39
The rice white green leaf 2 gene causes defects in chloroplast development and affects the plastid ribosomal protein S9.
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004 340(1) 133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
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Nakazono,M. and Hirai,A.
Mol. Gen. Genet. 1993 236(2-3) 341-346
Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice
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Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991 19(5) 983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
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Shimada H, Fukuta M, Ishikawa M, Sugiura M.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 1990 221(3) 395-402
Rice chloroplast RNA polymerase genes: the absence of an intron in rpoC1 and the presence of an extra sequence in rpoC2.
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Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989 217(2-3) 185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
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DB Reference
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Gramene ID
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GR:0100364
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Ontologies
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Gene Ontology
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plastid( GO:0009536 )
chloroplast( GO:0009507 )
transcription, DNA-dependent( GO:0006351 )
transcription( GO:0006350 )
DNA-directed RNA polymerase activity( GO:0003899 )
DNA binding( GO:0003677 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Jun 16, 2025
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Update info.