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Basic Information
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CGSNL 遺伝子シンボル
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RPOC1
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遺伝子シンボルシノニム
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rpoC1, RPO beta', RPObeta', OsRPOC1
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CGSNL 遺伝子名
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RNA POLYMERASE C1
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遺伝子名シノニム
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RNA polymeraseC1, RNA polymerase C1, DNA-directed RNA polymerase beta' chain, DNA-directed RNA polymerase subunit beta', Plastid-encoded RNA polymerase subunit beta', RNA polymerase subunit beta', RNA polymerase beta' chain, RNA polymerase beta' subunit-1, RNA polymerase beta' subunit, RNA polymerase beta' chain, RNA polymerase beta I subunit
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タンパク質名
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RNA POLYMERASE C1
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対立遺伝子
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染色体番号
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Pt
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解説
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PEP. EC=2.7.7.6 P0C504. P0C505(indica). P0C506(japonica). AY522329 (isolate 93-11 chloroplast complete genome), AY522330: AAS46112: Nip037 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901:CAA33987 (Japonica Group chloroplast genome). GU592207:ADD62825 (Japonica chloroplast comlete genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
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形質クラス
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生化学的性質
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発現
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osp1g00250
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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文献
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Liu L., Wang Y., Tian Y., Song S., Wu Z., Ding X., Zheng H., Huang Y., Liu S., Dong X., Wan J., Liu L.
Plants (Basel) 2023 12(2)
Isolation and Characterization of <i>SPOTTED LEAF42</i> Encoding a Porphobilinogen Deaminase in Rice.
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Qiu Z., Chen D., Teng L., Guan P., Yu G., Zhang P., Song J., Zeng Q., Zhu L.
Rice (N Y) 2022 15(1) 50
OsWHY1 Interacts with OsTRX z and is Essential for Early Chloroplast Development in Rice.
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Huang W., Zhang Y., Shen L., Fang Q., Liu Q., Gong C., Zhang C., Zhou Y., Mao C., Zhu Y., Zhang J., Chen H., Zhang Y., Lin Y., Bock R., Zhou F.
New Phytol. 2020
Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice.
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Zhang Q., Shen L., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Biomolecules 2020 10(2)
Characterization of the CRM Gene Family and Elucidating the Function of OsCFM2 in Rice.
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Zhu X., Ze M., Yin J., Chern M., Wang M., Zhang X., Deng R., Li Y., Liao H., Wang L., Tu B., Song L., He M., Li S., Wang W.M., Chen X., Wang J., Li W.
Plant Sci. 2020 290 110295
A phosphofructokinase B-type carbohydrate kinase family protein, PFKB1, is essential for chloroplast development at early seedling stage in rice.
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L L Liu, J You, Z Zhu, K Y Chen, M M Hu, H Gu, Z W Liu, Z Y Wang, Y H Wang, S J Liu, L M Chen, X Liu, Y L Tian, S R Zhou, L Jiang, J M Wan
Plant Cell Rep. 2020 39(1) 19-33
WHITE STRIPE LEAF8, encoding a deoxyribonucleoside kinase, is involved in chloroplast development in rice.
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Lin D., Kong R., Chen L., Wang Y., Wu L., Xu J., Piao Z., Lee G., Dong Y.
Sci Rep 2020 10(1) 8518
Chloroplast development at low temperature requires the pseudouridine synthase gene TCD3 in rice.
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Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019 20(18)
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
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Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018 9 782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
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Qiu Z., Chen D., He L., Zhang S., Yang Z., Zhang Y., Wang Z., Ren D., Qian Q., Guo L., Zhu L.
Rice (N Y) 2018 11(1) 39
The rice white green leaf 2 gene causes defects in chloroplast development and affects the plastid ribosomal protein S9.
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Zhou K., Ren Y., Zhou F., Wang Y., Zhang L., Lyu J., Wang Y., Zhao S., Ma W., Zhang H., Wang L., Wang C., Wu F., Zhang X., Guo X., Cheng Z., Wang J., Lei C., Jiang L., Li Z., Wan J.
Planta 2017 245(1) 45-60
Young Seedling stripe1 encodes a chloroplast nucleoid-associated protein required for chloroplast development in rice seedlings.
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Nock,C.J., Waters,D.L., Edwards,M.A., Bowen,S.G., Rice,N., Cordeiro,G.M. and Henry,R.J.
Plant Biotechnol J. 2011 9(3) 328-333
Chloroplast genome sequences from total DNA for plant identification
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Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004 340(1) 133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
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Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004 135(1) 412-420
A Comparison of Rice Chloroplast Genomes.
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Nakazono,M. and Hirai,A.
Mol. Gen. Genet. 1993 236(2-3) 341-346
Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice
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Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991 19(5) 983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
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Shimada H, Fukuta M, Ishikawa M, Sugiura M.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 1990 221(3) 395-402
Rice chloroplast RNA polymerase genes: the absence of an intron in rpoC1 and the presence of an extra sequence in rpoC2.
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Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989 217(2-3) 185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
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TextPresso Search
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Search textpresso for RPOC1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0100363
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オントロジー
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Gene Ontology
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plastid( GO:0009536 )
DNA binding( GO:0003677 )
chloroplast( GO:0009507 )
transcription, DNA-dependent( GO:0006351 )
transcription( GO:0006350 )
DNA-directed RNA polymerase activity( GO:0003899 )
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Trait Ontology
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Plant Ontology
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関連系統
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形質画像
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更新日
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2023-07-05 13:10:53.892
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更新情報
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