Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RBCS
Gene Symbol Synonym rbcS, OsRbcS, RBCS-C, RbcS2, OsRBCS2, RbcS1, OsRbcS2, OsrbcS1
Gene Name Synonym Small subunits of Rubisco, "Ribulose bisphosphate carboxylase small chain, chloroplastic", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1,5-bisphosphate carboxylase
Chromosome No. 12
Explanation EC= A2Y205(indica). Q0INY7(japonica). D00643. X07515. L22155. OsrbcS1 in Park et al. 2015. TO:0001015: photosynthetic rate.
Trait Class Character as QTL - Yield and productivity
Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK121444
MSU ID LOC_Os12g17600.1
RAP ID Os12g0274700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zhou K., Zhang C., Xia J., Yun P., Wang Y., Ma T., Li Z.
Rice (N Y) 2021  14(1)  47
Albino seedling lethality 4; Chloroplast 30S Ribosomal Protein S1 is Required for Chloroplast Ribosome Biogenesis and Early Chloroplast Development in Rice.
Wang Q., Zhu B., Chen C., Yuan Z., Guo J., Yang X., Wang S., Lv Y., Liu Q., Yang B., Sun C., Wang P., Deng X.
Rice (N Y) 2021  14(1)  50
A Single Nucleotide Substitution of GSAM Gene Causes Massive Accumulation of Glutamate 1-Semialdehyde and Yellow Leaf Phenotype in Rice.
Maheshwari C., Coe R.A., Karki S., Covshoff S., Tapia R., Tyagi A., Hibberd J.M., Furbank R.T., Quick W.P., Lin H.C.
J. Plant Physiol. 2021  260  153395
Targeted knockdown of ribulose-1, 5-bisphosphate carboxylase-oxygenase in rice mesophyll cells.
Hu W., Figueroa-Balderas R., Chi-Ham C., Lagarias J.C.
Plant Direct 2020  4(4)  e00210
Regulation of monocot and dicot plant development with constitutively active alleles of phytochrome B.
Li C., Li N., Huang R., Chen C., Guo J., Yang X., Zhang X., Sun C., Deng X., Wang P.
BMC Plant Biol. 2020  20(1)  345
A single nucleotide substitution at the 3'-end of SBPase gene involved in Calvin cycle severely affects plant growth and grain yield in rice.
Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019  100(1-2)  133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
Atul Prakash Sathe, Su X., Chen Z., Chen T., Wei X., Tang S., Xiao-Bo Zhang, Jian-Li Wu
Rice (N Y) 2019  12(1)  68
Identification and characterization of a spotted-leaf mutant spl40 with enhanced bacterial blight resistance in rice.
Liu E., Zeng S., Zhu S., Liu Y., Wu G., Zhao K., Liu X., Liu Q., Dong Z., Dang X., Xie H., Li D., Hu X., Hong D.
Plant Physiol. 2019  181(3)  1207-1222
Favorable Alleles of <i>GRAIN-FILLING RATE1</i> Increase the Grain-Filling Rate and Yield of Rice.
Cheng R., Gong L., Li Z., Liang Y.K.
J. Plant Physiol. 2019  232  39-50
Rice BIG gene is required for seedling viability.
Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018  69(12)  2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018  18(1)  264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
Lin D., Zheng K., Liu Z., Li Z., Teng S., Xu J., Dong Y.
Plant Genome 2018  11(1) 
Rice <i>TCM1</i> Encoding a Component of the TAC Complex is Required for Chloroplast Development under Cold Stress.
Shim J.S., Oh N., Chung P.J., Kim Y.S., Choi Y.D., Kim J.K.
Front Plant Sci 2018  9  310
Overexpression of <i>OsNAC14</i> Improves drought tolerance in Rice.
Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018   
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
Lin D., Jiang Q., Ma X., Zheng K., Gong X., Teng S., Xu J., Dong Y.
G3 (Bethesda) 2018  8(1)  253-263
Rice <i>TSV3</i> Encoding Obg-Like GTPase Protein Is Essential for Chloroplast Development During the Early Leaf Stage Under Cold Stress.
Zhang Z., Cui X., Wang Y., Wu J., Gu X., Lu T.
Mol Plant 2017  10(1)  86-98
The RNA Editing Factor wsp1 Is Essential for Chloroplast Development in Rice.
Wang S., Lei C., Wang J., Ma J., Tang S., Wang C., Zhao K., Tian P., Zhang H., Qi C., Cheng Z., Zhang X., Guo X., Liu L., Wu C., Wan J.
J. Exp. Bot. 2017  68(5)  899-913
SPL33, encoding an eEF1A-like protein, negatively regulates cell death and defense responses in rice.
Wang Y., Ren Y., Zhou K., Liu L., Wang J., Xu Y., Zhang H., Zhang L., Feng Z., Wang L., Ma W., Wang Y., Guo X., Zhang X., Lei C., Cheng Z., Wan J.
Front Plant Sci 2017  8  1116
WHITE STRIPE LEAF4 Encodes a Novel P-Type PPR Protein Required for Chloroplast Biogenesis during Early Leaf Development.
Li Y.Y., Shen A., Xiong W., Sun Q.L., Luo Q., Song T., Li Z.L., Luan W.J.
Rice (N Y) 2016  9(1)  46
Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
Zheng K., Zhao J., Lin D., Chen J., Xu J., Zhou H., Teng S., Dong Y.
Rice (N Y) 2016  9(1)  13
The Rice TCM5 Gene Encoding a Novel Deg protease protein is Essential for Chloroplast Development under High Temperatures.
Izumi M., Hidema J., Wada S., Kondo E., Kurusu T., Kuchitsu K., Makino A., Ishida H.
Plant Physiol. 2015  167(4)  1307-20
Establishment of Monitoring Methods for Autophagy in Rice Reveals Autophagic Recycling of Chloroplasts and Root Plastids during Energy Limitation.
Park Y.C., Kim J.J., Kim D.S., Jang C.S.
Planta 2015  241(5)  1119-29
Rice RING E3 ligase may negatively regulate gamma-ray response to mediate the degradation of photosynthesis-related proteins.
Morita K., Hatanaka T., Misoo S., Fukayama H.
Plant Physiol. 2014  164(1)  69-79
Unusual Small Subunit, OsRbcS1, that is not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice.
Miyazaki N.a, Ueno O.b, Saitou K.b
Plant Prod. Sci. 2013  16  37-40
Effects of nitrogen on the expression of ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit multigene family members in Rice (Oryza sativa L.)
Noguera D., Barot S., Laossi K.R., Cardoso J., Lavelle P., Cruz de Carvalho M.H.
Soil Biology and Biochemistry 2012  52  13-20
Biochar but not earthworms enhances rice growth through increased protein turnover
Park S.H., Chung P.J., Juntawong P., Bailey-Serres J., Kim Y.S., Jung H., Bang S.W., Kim Y.K., Do Choi Y., Kim J.K.
Plant Physiol. 2012  159(3)  1111-24
Posttranscriptional Control of Photosynthetic mRNA Decay under Stress Conditions Requires 3' and 5' Untranslated Regions and Correlates with Differential Polysome Association in Rice.
Fukayama H., Ueguchi C., Nishikawa K., Katoh N., Ishikawa C., Masumoto C., Hatanaka T., Misoo S.
Plant Cell Physiol. 2012  53(6)  976-86
Overexpression of Rubisco Activase Decreases the Photosynthetic CO2 Assimilation Rate by Reducing Rubisco Content in Rice Leaves.
Takano M,Inagaki N,Xie X,Kiyota S,Baba-Kasai A,Tanabata T,Shinomura T
Proc. Natl. Acad. Sci. U.S.A. 2009  106(34)  14705-10
Phytochromes are the sole photoreceptors for perceiving red/far-red light in rice.
Makino A,Sage RF
Plant Cell Physiol. 2007  48  1472-83
Temperature response of photosynthesis in transgenic rice transformed with 'sense' or 'antisense' rbcS.
Makino, Amane
Plant Cell Physiol. 2007  48(4)  626-637
Increased Rubisco Content in Transgenic Rice Transformed with the 'Sense' rbcS Gene.
Gesch RW, Boote KJ, Vu JC, Hartwell Allen Jr L , Bowes G.
Plant Physiol. 1998  118(2)  521-529
Changes in growth CO2 result in rapid adjustments of ribulose-1, 5-bisphosphate Carboxylase/Oxygenase small subunit gene expression in expanding and mature leaves of rice
Kyozuka,J., McElroy,D., Hayakawa,T., Xie,Y., Wu,R. and Shimamoto,K.
Plant Physiol. 1993  102(3)  991-1000
Light-regulated and cell-specific expression of tomato rbcS-gusA and rice rbcS-gusA fusion genes in transgenic rice.
Moon,E.P., Lee,K.W., Lee,J.S., Choi,Y.D. and Kim,H.J.
Mol. Cells 1991  1  287-294
Isolation and Characterization of cDNAs for Ribulose Bisphosphate Carboxylase Multigene Family in Rice (Oryza)
Matsuoka,M., Kano-Murakami,Y., Tanaka,Y., Ozeki,Y. and Yamamoto,N.
Plant Cell Physiol. 1988  29(6)  1015-1022
Classification and nucleotide sequence of cDNA encoding the small subunit of ribulose-1,5-bisphosphate carboxylase from rice
Xie,Y. and Wu,R.
Nucleic Acids Res. 1988  16(15)  7749
Nucleotide sequence of a ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit gene (rbcS) in rice.
TextPresso Search Search textpresso for RBCS ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology monooxygenase activity( GO:0004497 )
chloroplast( GO:0009507 )
ribulose-bisphosphate carboxylase activity( GO:0016984 )
plastid( GO:0009536 )
reductive pentose-phosphate cycle( GO:0019253 )
photorespiration( GO:0009853 )
oxidation reduction( GO:0055114 )
Trait Ontology nitrogen sensitivity( TO:0000011 )
photosynthetic rate( TO:0001015 )
total biomass yield( TO:0000457 )
grain yield( TO:0000396 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 21, 2021