Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIKM
Gene Symbol Synonym Pik-m, Pi-m, Pi-km, Pikm, Pi m, Pikm1-TS, Pikm2-TS, Pi-km1, Pi-km2
CGSNL Gene Name PYRICULARIA ORYZAE RESISTANCE KM
Gene Name Synonym Pyricularia oryzae resistance KM, Magnaporthe grisea resistance km, Blast resistance km
Protein Name
Allele
Chromosome No. 11
Explanation Pyricularia oryzae resistance. Original line is Minehikari (Japonica). Map position (115.1-117.0 cM). Pi-km is one of the alleles in the Pi-k locus. AB462324(Pikm1), AB462325(Pikm2), AB462256 (Genomic DNA). Pikm-specific resistance is conferred by cooperation of Pikm1-TS and Pikm2-TS (Ashikawa et al. 2008). AB510251-AB510347, AB519718-AB519769.
Trait Class Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID Os11g0689000/Os11g0689100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Yadav M.K., S A., Ngangkham U., Shubudhi H.N., Bag M.K., Adak T., Munda S., Samantaray S., Jena M.
PLoS ONE 2017  12(4)  e0176236
Use of molecular markers in identification and characterization of resistance to rice blast in India.
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Luo,S., Zhang,Y., Hu,Q., Chen,J., Li,K., Lu,C., Liu,H., Wang,W. and Kuang,H.
Plant Physiol. 2012  159(1)  197-210
Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat- encoding Genes in the Grass Family
Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012  1  37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
Costanzo,S. and Jia,Y.
Plant Sci. 2010  178(6)  523-530
Sequence variation at the rice blast resistance gene Pi-km locus: Implications for the development of allele specific markers
Ashikawa,I., Wu,J., Matsumoto,T. and Ishikawa,R.
J. Gen. Plant Pathol. 2010  76(1)  37-42
Haplotype diversity and molecular evolution of the rice Pikm locus for blast resistance
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Ashikawa,I., Hayashi,N., Yamane,H., Kanamori,H., Wu,J., Matsumoto,T., Ono,K. and Yano,M.
Genetics 2008  180(4)  2267-2276
Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance
Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008  21(7)  859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
Li Y.B., Wu C.J., Jiang G.H., Wang L.Q., He Y.Q.
Plant Breeding 2007  126  541-547
Dynamic analyses of rice blast resistance for the assessment of genetic and environmental effects.
Hayashi K, Yoshida H, Ashikawa I.
Theor. Appl. Genet. 2006  113(2)  251-260
Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes.
Bryan,G.T., Wu,K.S., Farrall,L., Jia,Y., Hershey,H.P., McAdams,S.A., Faulk,K.N., Donaldson,G.K., Tarchini,R. and Valent,B.
Plant Cell 2000  12(11)  2033-2045
tA single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta.
Kaji, R. and T. Ogawa
Breeding Science 1996  46(Suppl. 1)  70
RFLP mapping of a blast resistance gene, Pi-km, in rice.
Kinoshita, T.
RGN 1995  12  9-24
I. New gene symbols registered.
Inukai, T., R.J. Nelson, R.S. Zeigler, S. Sarkarung, D.J. Mackill, J.M. Bonman, I. Takamure and T. Kinoshita
Phytopathology 1994  84  1278-1283.
Allelism of blast resistance genes in near-isogenic lines of rice.
Kiyosawa S.
RGN 1984  1  95-96
Establishment of differential varieties for pathogenicity test of rice blast fungus
Kiyosawa, S.
Japan. J. Breed. 1978  28(4)  287-296.
Identification of blast-resistance genes in some varieties.
Kiyosawa S.
Japan. J. Breeding 1969  19  61-73
Inheritance of resistance of rice varieties to a Philippine fungus strain of Pyricularia oryzae
Kiyosawa S.
Japan. J. Breeding 1968  18  193-205
Inheritance of blast-resistance in some Chinese rice varieties and their derivatives
TextPresso Search Search textpresso for PIKM ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology serine-type endopeptidase inhibitor activity( GO:0004867 )
response to fungus( GO:0009620 )
ATP binding( GO:0005524 )
defense response( GO:0006952 )
nucleoside-triphosphatase activity( GO:0017111 )
ADP binding( GO:0043531 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 25, 2017


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