Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PICO39
Gene Symbol Synonym PiCO39(t), Pi-CO39, Pi-CO39(t), pi-CO39(t)
Gene Name Synonym Pyricularia oryzae resistance CO39(Indica), Magnaporthe grisea resistance CO39, Blast resistance CO39
Protein Name
Chromosome No. 11
Trait Class Tolerance and resistance - Disease resistance
cDNA Accession No. -
Links -
INSD Accession List
(Test version)
Locate(cM) 49.1
Link map Classical linkage map
Guo L., Cesari S., de Guillen K., Chalvon V., Mammri L., Ma M., Meusnier I., Bonnot F., Padilla A., Peng Y.L., Liu J., Kroj T.
Proc. Natl. Acad. Sci. U.S.A. 2018  115(45)  11637-11642
Specific recognition of two MAX effectors by integrated HMA domains in plant immune receptors involves distinct binding surfaces.
Cesari S., Thilliez G., Ribot C., Chalvon V., Michel C., Jauneau A., Rivas S., Alaux L., Kanzaki H., Okuyama Y., Morel J.B., Fournier E., Tharreau D., Terauchi R., Kroj T.
Plant Cell 2013  25(4)  1463-81
The Rice Resistance Protein Pair RGA4/RGA5 Recognizes the Magnaporthe oryzae Effectors AVR-Pia and AVR1-CO39 by Direct Binding.
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012  1  37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
Zheng Y., Zheng W., Lin F., Zhang Y., Yi Y., Wang B., Lu G., Wang Z., Wu W.
MPMI 2011  24  13-17
AVR1-CO39 Is a Predominant Locus Governing the Broad Avirulence of Magnaporthe oryzae 2539 on Cultivated Rice (Oryza sativa L.)
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008  21(7)  859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
Tosa Y., Osue J., Eto Y., Oh H.S., Nakayashiki H., Mayama S., Leong S.A.
Mol. Plant Microbe Interact. 2005  18(11)  1148-60
Evolution of an avirulence gene, AVR1-CO39, concomitant with the evolution and differentiation of Magnaporthe oryzae.
Chauhan RS, Farman ML, Zhang HB, Leong SA.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  267(5)  603-612
Genetic and physical mapping of a rice blast resistance locus, Pi-CO39(t), that corresponds to the avirulence gene AVR1-CO39 of Magnaporthe grisea.
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DB Reference
Gramene ID -
Gene Ontology response to fungus( GO:0009620 )
Trait Ontology -
Plant Ontology -
Related Strains
Phenotype images
Last updated
Apr 28, 2019