Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ZIP1
Gene Symbol Synonym OsZIP1
CGSNL Gene Name ZINC TRANSPORTER 1
Gene Name Synonym zinc transporter 1, Zrt-Irt-like protein 1, Zinc-regulated transporter 1
Protein Name ZINC TRANSPORTER 1
Allele oszip1
Chromosome No. 1
Explanation AY302058. PO:0005020; vascular bundle ; PO:0000036; leaf vascular system ; PO:0009005; root ; PO:0009025; leaf. GRO:0007139; A-vegetative stage. TO:0006059: cadmium content trait. TO:0020090: zinc content trait. TO:0020092: copper content trait. TO:0006053: zinc concentration.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AY302058
MSU ID LOC_Os01g74110.1
RAP ID Os01g0972200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Liu X.S., Feng S.J., Zhang B.Q., Wang M.Q., Cao H.W., Rono J.K., Chen X., Yang Z.M.
BMC Plant Biol. 2019  19(1)  283
OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice.
Kumari K., Kumar P., Sharma V.K., Singh S.K.
J. Genet. 2019  98 
Genomic marker assisted identification of genetic loci and genes associated with variation of grain zinc concentration in rice.
Zheng X., Chen L., Li X.
Botanical Studies 2018  59(1)  22
Arabidopsis and rice showed a distinct pattern in ZIPs genes expression profile in response to Cd stress.
Tanaka N., Uraguchi S., Kajikawa M., Saito A., Ohmori Y., Fujiwara T.
Plant J. 2018  96(5)  997-1006
A rice PHD-finger protein OsTITANIA, is a growth regulator that functions through elevating expression of transporter genes for multiple metals.
Suzuki M., Bashir K., Inoue H., Takahashi M., Nakanishi H., Nishizawa N.K.
Rice (N Y) 2012  5  9
Accumulation of starch in Zn-deficient rice
Narayanan NN, Vasconcelos MW, Grusak MA.
Plant Physiol. Biochem. 2007  45(5)  277-86.
Expression profiling of Oryza sativa metal homeostasis genes in different rice cultivars using a cDNA macroarray.
Nakanishi H., Ogawa I., Ishimaru Y., Mori S., Nishizawa N.
Soil Sci. Plant Nutr. 2006  52(4)  464 469
Iron deficiency enhances cadmium uptake and translocation mediated by the Fe^<2+> transporters OsIRT1 and OsIRT2 in rice
Ishimaru,Y., Suzuki,M., Tsukamoto,T., Suzuki,K., Nakazono,M., Kobayashi,T., Wada,Y., Watanabe,S., Matsuhashi,S., Takahashi,M., Nakanishi,H., Mori,S. and Nishizawa,N.K.
Plant J. 2006  45(3)  335-346
Rice plants take up iron as an Fe3+-phytosiderophore and as Fe2+
Ishimaru Y, Suzuki M, Kobayashi T, Takahashi M, Nakanishi H, Mori S, Nishizawa NK.
J. Exp. Bot. 2005  56(422)  3207-14.
OsZIP4, a novel zinc-regulated zinc transporter in rice.
Ramesh,S., Shin,R., Eide,D.J. and Schachtman,D.P.
Plant Physiol. 2003  133(1)  126-134
Differential metal selectivity and gene expression of two zinc transporters from rice
Nantel,A. and Quatrano,R.S.
J. Biol. Chem. 1996  271(49)  31296-31305
Characterization of three rice basic/leucine zipper factors, including two inhibitors of EmBP-1 DNA binding activity.
TextPresso Search Search textpresso for ZIP1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0101281
Ontologies
Gene Ontology response to copper ion( GO:0046688 )
plasma membrane( GO:0005886 )
endoplasmic reticulum( GO:0005783 )
cation efflux transmembrane transporter activity( GO:0046583 )
zinc ion transmembrane transporter activity( GO:0005385 )
integral to membrane( GO:0016021 )
response to zinc ion( GO:0010043 )
zinc ion transport( GO:0006829 )
response to cadmium ion( GO:0046686 )
Trait Ontology -
Plant Ontology leaf vascular system( PO:0000036 )
vascular bundle( PO:0005020 )
root( PO:0009005 )
vascular leaf( PO:0009025 )
Related Strains
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Phenotype images
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Last updated
Nov 11, 2021


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