Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | TUBA1 |
| Gene Symbol Synonym | OsTubA1, TubA1, OS-TubA3, TubA3 |
| CGSNL Gene Name | TUBULIN ALPHA-1 CHAIN |
| Gene Name Synonym | Tubulin alpha-1 chain, Tubulin alpha-1 |
| Protein Name | TUBULIN ALPHA-1 CHAIN |
| Allele | |
| Chromosome No. | 7 |
| Explanation | X91808. P28752. OS-TubA3 in Qin et al. 1997. tubulin/FtsZ domain- containing protein. |
| Trait Class |
Biochemical character
Seed - Physiological traits - Dormancy Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK069140
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| MSU ID |
LOC_Os07g38730.1
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| RAP ID |
Os07g0574800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Fang C., Zhang P., Li L., Yang L., Mu D., Yan X., Li Z., Lin W.
BMC Plant Biol. 2020 20(1) 236 serine hydroxymethyltransferase localised in the endoplasmic reticulum plays a role in scavenging H2O2 to enhance rice chilling tolerance.
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Liu S.J., Xu H.H., Wang W.Q., Li N., Wang W.P., Møller IM., Song S.Q.
Physiol Plant 2014 A proteomic analysis of rice seed germination as affected by high temperature and ABA treatment.
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Song Y.a, Cui J.a, Zhang H.b, Wang G.a, Zhao F.J.c, Shen Z.a
Plant Soil 2013 366 647-658 Proteomic analysis of copper stress responses in the roots of two rice (Oryza sativa L.) varieties differing in Cu tolerance
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Jeon JS, Lee S, Jung KH, Jun SH, Kim C, An G.
Plant Physiol. 2000 123(3) 1005-1014 Tissue-preferential expression of a rice alpha-tubulin gene, OsTubA1, mediated by the first intron.
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X Qin, S Gianì, D Breviario
Biochim. Biophys. Acta 1997 1354(1) 19-23 Molecular cloning of three rice alpha-tubulin isotypes: differential expression in tissues and during flower development.
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| TextPresso Search | Search textpresso for TUBA1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
microtubule( GO:0005874 )
GTP binding( GO:0005525 ) GTPase activity( GO:0003924 ) structural molecule activity( GO:0005198 ) protein polymerization( GO:0051258 ) response to temperature stimulus( GO:0009266 ) seed germination( GO:0009845 ) cell growth( GO:0016049 ) microtubule-based movement( GO:0007018 ) response to copper ion( GO:0046688 ) structural constituent of cytoskeleton( GO:0005200 ) microtubule-based process( GO:0007017 ) cytoplasm( GO:0005737 ) |
| Trait Ontology |
temperature response trait( TO:0000432 )
copper sensitivity( TO:0000021 ) |
| Plant Ontology |
seed( PO:0009010 )
0 seed germination stage( PO:0007057 ) |
| Related Strains | |
| - | |
| Phenotype images | |
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| Last updated | |
| Aug 27, 2020 | |
