Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TUBA1
Gene Symbol Synonym OsTubA1, TubA1, OS-TubA3, TubA3
CGSNL Gene Name TUBULIN ALPHA-1 CHAIN
Gene Name Synonym Tubulin alpha-1 chain, Tubulin alpha-1
Protein Name TUBULIN ALPHA-1 CHAIN
Allele
Chromosome No. 7
Explanation X91808. P28752. OS-TubA3 in Qin et al. 1997. tubulin/FtsZ domain- containing protein.
Trait Class Biochemical character
Seed - Physiological traits - Dormancy
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK069140
MSU ID LOC_Os07g38730.1
RAP ID Os07g0574800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Fang C., Zhang P., Li L., Yang L., Mu D., Yan X., Li Z., Lin W.
BMC Plant Biol. 2020  20(1)  236
serine hydroxymethyltransferase localised in the endoplasmic reticulum plays a role in scavenging H2O2 to enhance rice chilling tolerance.
Liu S.J., Xu H.H., Wang W.Q., Li N., Wang W.P., Møller IM., Song S.Q.
Physiol Plant 2014   
A proteomic analysis of rice seed germination as affected by high temperature and ABA treatment.
Song Y.a, Cui J.a, Zhang H.b, Wang G.a, Zhao F.J.c, Shen Z.a
Plant Soil 2013  366  647-658
Proteomic analysis of copper stress responses in the roots of two rice (Oryza sativa L.) varieties differing in Cu tolerance
Jeon JS, Lee S, Jung KH, Jun SH, Kim C, An G.
Plant Physiol. 2000  123(3)  1005-1014
Tissue-preferential expression of a rice alpha-tubulin gene, OsTubA1, mediated by the first intron.
X Qin, S Gianì, D Breviario
Biochim. Biophys. Acta 1997  1354(1)  19-23
Molecular cloning of three rice alpha-tubulin isotypes: differential expression in tissues and during flower development.
TextPresso Search Search textpresso for TUBA1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology microtubule( GO:0005874 )
GTP binding( GO:0005525 )
GTPase activity( GO:0003924 )
structural molecule activity( GO:0005198 )
protein polymerization( GO:0051258 )
response to temperature stimulus( GO:0009266 )
seed germination( GO:0009845 )
cell growth( GO:0016049 )
microtubule-based movement( GO:0007018 )
response to copper ion( GO:0046688 )
structural constituent of cytoskeleton( GO:0005200 )
microtubule-based process( GO:0007017 )
cytoplasm( GO:0005737 )
Trait Ontology temperature response trait( TO:0000432 )
copper sensitivity( TO:0000021 )
Plant Ontology seed( PO:0009010 )
0 seed germination stage( PO:0007057 )
Related Strains
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Phenotype images
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Last updated
Aug 27, 2020


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