Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol PI5
Gene Symbol Synonym Pi5(t), Pi5, Pi3, RMg22, RMg21, Pi-5(t), Pi-5, Pi 5(t), Pi3(t), Pi5-1, Pi5-2
CGSNL Gene Name PYRICULARIA ORYZAE RESISTANCE 5
Gene Name Synonym Pyricularia oryzae resistance 5, Magnaporthe grisea resistance-5, Blast resistance 5
Protein Name
Allele
Chromosome No. 9
Explanation resistant to several races of Pyricularia grisea. [RGN12:19]. PO:0009025; leaf. GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. Pi5 locus was previously reported to be linked to the RG788 on chromosome 4. Pi3(t) and Pi5(t) are the same resistance gene. Original line is Moroberekan (Japonica). The two NB-LRR genes Pi5-1 and Pi5-2 are required for rice Pi5-mediated resistance to M. oryzae (Lee et al. 2009). EU869185(LOC_Os09g15840=Os09g0327600) = Pi5-1, EU869186(LOC_Os09g15850=Os09g0327800) = Pi5-2
Trait Class Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK110932
MSU ID LOC_Os09g15840.1
RAP ID Os09g0327600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM) 122.0
Link map Classical linkage map
References
Yadav M.K., S A., Ngangkham U., Shubudhi H.N., Bag M.K., Adak T., Munda S., Samantaray S., Jena M.
PLoS ONE 2017  12(4)  e0176236
Use of molecular markers in identification and characterization of resistance to rice blast in India.
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Luo,S., Zhang,Y., Hu,Q., Chen,J., Li,K., Lu,C., Liu,H., Wang,W. and Kuang,H.
Plant Physiol. 2012  159(1)  197-210
Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat- encoding Genes in the Grass Family
Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012  1  37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
Lee,S.K., Song,M.Y., Seo,Y.S., Kim,H.K., Ko,S., Cao,P.J., Suh,J.P., Yi,G., Roh,J.H., Lee,S., An,G., Hahn,T.R., Wang,G.L., Ronald,P. and Jeon,J.S.
Genetics 2009  181(4)  1627-1638
Rice Pi5-Mediated Resistance to Magnaporthe oryzae Requires the Presence of Two Coiled-Coil-Nucleotide-Binding-Leucine-Rich Repeat Genes
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Soon-Wook Kwon, Young-Chan Cho, Yeon-Gyu Kim, Jung-Pil Suh, Ji-Ung Jeung, Jae-Hwan Roh, Sang-Kyu Lee, Jong-Seong Jeon, Sae-Jun Yang, Young-Tae Lee
Mol. Cells 2008  25(3)  407-16
Development of near-isogenic Japonica rice lines with enhanced resistance to Magnaporthe grisea.
Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008  21(7)  859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
Cho Y.C., Kwon S.W., Choi I.S., Lee S.K., Jeon J.S., Oh M.K., Roh J.H., Hwang H.G., Yang S.J., Kim Y.G.
J. Crop Sci. Biotech. 2007  10  265-276
Identification of Major Blast Resistance Genes in Korean Rice Varieties (Oryza sativa L.) Using Molecular Markers
Yi G., Lee S.K., Hong Y.K., Cho Y.C., Nam M.H., Kim S.C., Han S.S., Wang G.L., Hahn T.R., Ronald P.C., Jeon J.S.
Theor. Appl. Genet. 2004  109(5)  978-85
Use of Pi5(t) markers in marker-assisted selection to screen for cultivars with resistance to Magnaporthe grisea.
Muralidharan, K., D. Krishnaveni, G.S. Laha, C.S. Reddy, M. Srinivasprasad and R. Sridhar
RGN 2003  20  94-96
Evaluation of blast resistance genes in India.
Jeon JS, Chen D, Yi GH, Wang GL, Ronald PC.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2003  269(2)  280-289
Genetic and physical mapping of Pi5(t), a locus associated with broad-spectrum resistance to rice blast.
Chen, D., G.L. Wang and P.C. Ronald
RGN 1997  14  95-98.
Location of the rice blast resistance locus Pi5(t) in Moroberekan by AFLP bulk segregant analysis.
Inukai, T. and A. Sako
Breeding Science 1997  47(Suppl. 1)  268
Determination of chromosomal location of blast resistance gene in West African upland cultivar Moroberekan.
Inukai, T., R.J. Nelson, R.S. Zeigler, S. Sarkarung, D.J. Mackill, J.M. Bonman, I. Takamure and T. Kinoshita
Rice Genetics III. IRRI, Manila, Philippines. 1996    447-450.
Genetic analysis of blast resistance in tropical rice cultivars using near-isogenic lines.
Inukai, T., R.S. Zeigler, S. Sarkarung, M. Bronson, L.V. Dung, T. Kinoshita and R.J. Nelson
Theor. Appl. Genet. 1996  93  560-567.
Development of pre-isogenic lines for rice blast-resistance by marker-aided selection from a recombinant inbred population.
Kinoshita, T.
RGN 1995  12  9-24
I. New gene symbols registered.
Wang, G.L., D.J. Mackill, J.M. Bonman, S.R. McCouch, M.C. Champoux and R.J. Nelson
Genetics 1994  136  1421-1434.
RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistance rice cultivar.
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
TextPresso Search Search textpresso for PI5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060632
Ontologies
Gene Ontology response to fungus( GO:0009620 )
Trait Ontology leaf blast disease resistance( TO:0000468 )
panicle blast disease resistance( TO:0000477 )
potassium chlorate resistance( TO:0000502 )
Plant Ontology vascular leaf( PO:0009025 )
Related Strains
-
Phenotype images
-
Last updated
Jun 25, 2017


Login ID
Password
/rice/oryzabase