Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | TATC |
| Gene Symbol Synonym | OsTATC, OsTatC, TatC |
| CGSNL Gene Name | SEC-INDEPENDENT PROTEIN TRANSLOCASE SUBUNIT C |
| Gene Name Synonym | homologue of E. coli TATC, Sec-independent protein translocase subunit C |
| Protein Name | SEC-INDEPENDENT PROTEIN TRANSLOCASE SUBUNIT C |
| Allele | |
| Chromosome No. | 1 |
| Explanation | AB050885. PO:0009006; shoot ; PO:0009025; leaf. GRO:0007142; 1-4 leaf stage. LOC_Os01g31680. a predicted lethal-phenotype gene in Lloyd et al. 2015. |
| Trait Class |
Tolerance and resistance - Stress tolerance
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK067297
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| MSU ID |
LOC_Os01g31680.1
LOC_Os01g31680.2 |
| RAP ID |
Os01g0501700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Lloyd J.P., Seddon A.E., Moghe G.D., Simenc M.C., Shiu S.H.
Plant Cell 2015 Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes.
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Du H., Wu N., Fu J., Wang S., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2012 63(18) 6467-80 A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice.
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Dubery, I.A.
J. Plant Physiol. 2007 164 1231 Expression of mitochondrial tatC in Nicotiana tabacum is responsive to benzothiadiazole and salicylic acid.
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Agrawal,G.K., Yamazaki,M., Kobayashi,M., Hirochika,R., Miyao,A. and Hirochika,H.
Plant Physiol. 2001 125(3) 1248-1257 Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene.
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| TextPresso Search | Search textpresso for TATC ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | GR:0101258 |
| Ontologies | |
| Gene Ontology |
protein transporter activity( GO:0008565 )
protein secretion( GO:0009306 ) plastid( GO:0009536 ) abscisic acid biosynthetic process( GO:0009688 ) P-P-bond-hydrolysis-driven protein transmembrane transporter activity( GO:0015450 ) membrane( GO:0016020 ) |
| Trait Ontology |
chlorophyll content( TO:0000495 )
drought related trait( TO:0000394 ) abscisic acid concentration( TO:0000478 ) chlorophyll-b content( TO:0000295 ) chlorophyll-a content( TO:0000293 ) |
| Plant Ontology |
shoot system( PO:0009006 )
vascular leaf( PO:0009025 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Oct 16, 2015 | |
