Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SPY
Gene Symbol Synonym OsSPY
CGSNL Gene Name SPINDLY
Gene Name Synonym Spindly, Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Protein Name PROBABLE UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY
Allele
Chromosome No. 8
Explanation O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE. O-linked N-acetylglucosamine transferase. EC=2.4.1.- Q6YZI0. RO:0007048; 04-stem elongation stage. TO:0000847: panicle inflorescence morphology trait. TO:0000740: branch morphology trait.
Trait Class Vegetative organ - Culm
Reproductive organ - Inflorescence
Reproductive organ - panicle
Expression
Sequence/Locus
cDNA Accession No. AK065854
MSU ID LOC_Os08g44510.1
RAP ID Os08g0559300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Ke S., Liu S., Luan X., Xie X.M., Hsieh T.F., Zhang X.Q.
Rice (N Y) 2019  12(1)  7
Mutation in a putative glycosyltransferase-like gene causes programmed cell death and early leaf senescence in rice.
Yano K., Morinaka Y., Wang F., Huang P., Takehara S., Hirai T., Ito A., Koketsu E., Kawamura M., Kotake K., Yoshida S., Endo M., Tamiya G., Kitano H., Ueguchi-Tanaka M., Hirano K., Matsuoka M.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(42)  21262-21267
GWAS with principal component analysis identifies a gene comprehensively controlling rice architecture.
Phanchaisri B., Samsang N., Yu L., Singkarat S., Anuntalabhochai S.
Mutat. Res. 2012  734(1-2)  56-61
Expression of OsSPY and 14-3-3 genes involved in plant height variations of ion-beam-induced KDML 105 rice mutants.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Shimada A, Ueguchi-Tanaka M, Sakamoto T, Fujioka S, Takatsuto S, Yoshida S, Sazuka T, Ashikari M, Matsuoka M.
Plant J. 2006  48(3)  390-402
The rice SPINDLY gene functions as a negative regulator of gibberellin signaling by controlling the suppressive function of the DELLA protein, SLR1, and modulating brassinosteroid synthesis.
TextPresso Search Search textpresso for SPY ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080023
Ontologies
Gene Ontology nucleus( GO:0005634 )
binding( GO:0005488 )
transferase activity, transferring glycosyl groups( GO:0016757 )
response to gibberellin stimulus( GO:0009739 )
gibberellic acid mediated signaling( GO:0009740 )
negative regulation of gibberellic acid mediated signaling( GO:0009938 )
Trait Ontology internode length( TO:0000145 )
leaf angle( TO:0000206 )
plant height( TO:0000207 )
panicle color( TO:0000201 )
panicle size( TO:0006032 )
stem length( TO:0000576 )
spikelet number( TO:0000456 )
secondary branch number( TO:0000557 )
panicle length( TO:0000040 )
primary branch number( TO:0000547 )
panicle number( TO:0000152 )
gibberellic acid sensitivity( TO:0000166 )
Plant Ontology inflorescence meristem( PO:0000230 )
inflorescence( PO:0009049 )
stem internode( PO:0020142 )
Related Strains
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Phenotype images
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Last updated
Mar 20, 2020


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