Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RAA1
Gene Symbol Synonym OsRAA1, OsFPFL1, FPFL1
CGSNL Gene Name ROOT ARCHITECTURE ASSOCIATED 1
Gene Name Synonym root architecture associated-1, FPF1-like protein 1, FPF1-like 1, flowering-promoting factor 1-like 1
Protein Name
Allele
Chromosome No. 1
Explanation AY659938. Q9LGE3. GO:2000280: regulation of root development.
Trait Class Character as QTL - Root activity
Expression
Sequence/Locus
cDNA Accession No. AK070626
MSU ID LOC_Os01g15340.1
RAP ID Os01g0257300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Li W., Xiong Y., Lai L.B., Zhang K., Li Z., Kang H., Dai L., Gopalan V., Wang G.L., Liu W.
Plant Biotechnol. J. 2021   
The rice RNase P protein subunit Rpp30 confers broad-spectrum resistance to fungal and bacterial pathogens.
Guo Y., Wu Q., Xie Z., Yu B., Zeng R., Min Q., Huang J.
Rice (N Y) 2020  13(1)  2
OsFPFL4 is Involved in the Root and Flower Development by Affecting Auxin Levels and ROS Accumulation in Rice (Oryza sativa).
Jiang W., Zhou S., Zhang Q., Song H., Zhou D.X., Zhao Y.
J. Exp. Bot. 2017  68(11)  2787-2798
Transcriptional regulatory network of WOX11 is involved in the control of crown root development, cytokinin signals, and redox in rice.
Du H., Wu N., Fu J., Wang S., Li X., Xiao J., Xiong L.
J. Exp. Bot. 2012  63(18)  6467-80
A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice.
Han,Y., Jiang,J., Liu,H., Ma,Q., Xu,W., Xu,Y., Xu,Z. and Chong,K.
Plant Sci. 2005  169(3)  487-495
Overexpression of OsSIN, encoding a novel small protein, causes short internodes in Oryza sativa
Ge,L., Chen,H., Jiang,J.F., Zhao,Y., Xu,M.L., Xu,Y.Y., Tan,K.H., Xu,Z.H. and Chong,K.
Plant Physiol. 2004  135(3)  1502-1513
Overexpression of OsRAA1 Causes Pleiotropic Phenotypes in Transgenic Rice Plants, including Altered Leaf, Flower, and Root Development and Root Response to Gravity.
DB Reference
Gramene ID -
Ontologies
Gene Ontology root development( GO:0048364 )
response to gravity( GO:0009629 )
GTP binding( GO:0005525 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
response to auxin stimulus( GO:0009733 )
negative regulation of mitotic metaphase/anaphase transition( GO:0045841 )
response to gibberellin stimulus( GO:0009739 )
positive regulation of flower development( GO:0009911 )
Trait Ontology root development trait( TO:0000656 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Oct 21, 2021

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