Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NRT1
Gene Symbol Synonym OsNRT1, OsNRT1;1, OsNRT1.1, OsNRT1.1a, OsNRT1.1b, NRT1.1, NRT1.1a, NRT1.1b, OsNPF8.9, NPF8.9, OsNPF8.9a, NPF8.9a, OsNRT1.1B
CGSNL Gene Name NITRATE TRANSPORTER 1
Gene Name Synonym nitrate transporter gene 1, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 8.9, PTR2-like gene
Protein Name NITRATE TRANSPORTER 1
Allele
Chromosome No. 3
Explanation AF140606. peptide transporter (PTR) gene family. TO:0020094: nitrate content. TO:0020098: nitrate sensitivity. GO:0090548: response to nitrate starvation.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK066920
MSU ID LOC_Os03g13274.1
LOC_Os03g13274.2
LOC_Os03g13274.3
LOC_Os03g13274.4
RAP ID Os03g0235900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Luo J., Hang J., Wu B., Wei X., Zhao Q., Fang Z.
The Crop Journal 2023  11(3)  785-799
Co-overexpression of genes for nitrogen transport, assimilation, and utilization boosts rice grain yield and nitrogen use efficiency
Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022  10  397-406
OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
Paul K., Saha C., Nag M., Mandal D., Naiya H., Sen D., Mitra S., Kumar M., Bose D., Mukherjee G., Naskar N., Lahiri S., Das Ghosh U., Tripathi S., Sarkar M.P., Banerjee M., Kleinert A., Valentine A.J., Tripathy S., Sinharoy S., Seal A.
Plant Cell 2020  32(2)  486-507
A Tripartite Interaction among the Basidiomycete <i>Rhodotorula mucilaginosa</i>, N2-Fixing Endobacteria, and Rice Improves Plant Nitrogen Nutrition.
Yang X., Xia X., Zeng Y., Nong B., Zhang Z., Wu Y., Tian Q., Zeng W., Gao J., Zhou W., Liang H., Li D., Deng G.
BMC Plant Biol. 2020  20(1)  193
Genome-wide identification of the peptide transporter family in rice and analysis of the PTR expression modulation in two near-isogenic lines with different nitrogen use efficiency.
Jagadhesan B., Sathee L., Meena H.S., Jha S.K., Chinnusamy V., Kumar A., Kumar S.
Sci Rep 2020  10(1)  9368
Genome wide analysis of NLP transcription factors reveals their role in nitrogen stress tolerance of rice.
Sun Y., Luo W., Jain A., Liu L., Ai H., Liu X., Feng B., Zhang L., Zhang Z., Guohua X., Sun S.
BMC Plant Biol. 2018  18(1)  241
OsPHR3 affects the traits governing nitrogen homeostasis in rice.
Fan X., Feng H., Tan Y., Xu Y., Miao Q., Xu G.
J Integr Plant Biol 2015   
A putative 6 trans-membrane nitrate transporter OsNRT1.1b plays a key role in rice under low nitrogen.
Sophie Léran, Varala K., Jean-Christophe Boyer, Chiurazzi M., Crawford N., Françoise Daniel-Vedele, David L., Dickstein R., Fernandez E., Forde B., Gassmann W., Geiger D., Gojon A., Ji-Ming Gong, Barbara A Halkier, Jeanne M Harris, Hedrich R., Anis M Limami, Rentsch D., Seo M., Yi-Fang Tsay, Zhang M., Coruzzi G., Benoît Lacombe
Trends Plant Sci. 2014  19(1)  5-9
A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants.
Fan X., Xie D., Chen J., Lu H., Xu Y., Ma C., Xu G.
Plant Sci. 2014  227  1-11
Over-expression of OsPTR6 in rice increased plant growth at different nitrogen supplies but decreased nitrogen use efficiency at high ammonium supply.
Wang H., Ahan J., Wu Z., Shi D., Liu B., Yang C.
Plant Soil 2012  355  131-147
Alteration of nitrogen metabolism in rice variety 'Nipponbare' induced by alkali stress
Wang H., Wu Z., Han J., Zheng W., Yang C.
PLoS ONE 2012  7(5)  e37817
Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants.
Lin,C.M., Koh,S., Stacey,G., Yu,S.M., Lin,T.Y. and Tsay,Y.F.
Plant Physiol. 2000  122(2)  379-388
Cloning and functional characterization of a constitutively expressed nitrate transporter gene, OsNRT1, from rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to fungus( GO:0009620 )
response to symbiotic fungus( GO:0009610 )
inorganic anion transmembrane transporter activity( GO:0015103 )
transporter activity( GO:0005215 )
membrane( GO:0016020 )
response to nitrate( GO:0010167 )
response to starvation( GO:0042594 )
Trait Ontology -
Plant Ontology root( PO:0009005 )
Related Strains
-
Phenotype images
-
Last updated
Jan 17, 2026

/rice/oryzabase