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Basic Information
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CGSNL Gene Symbol
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NAC1
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Gene Symbol Synonym
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OsNAC1, ONAC027, ONAC27, NAC27, OMTN1, OsNAC1/ONAC027, DLN60, OsDLN60, OsORE1
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CGSNL Gene Name
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NAC DOMAIN-CONTAINING PROTEIN 1
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Gene Name Synonym
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NAC domain-containing protein 027, NAC domain-containing protein 27, Oryza miR164-targeted NAC1, miR164-targeted NAC1, DLN repressor 60, DLN motif protein 60
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Protein Name
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NAC DOMAIN-CONTAINING PROTEIN 1
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Allele
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Chromosome No.
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2
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Explanation
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miR164c target gene. OsORE1 in Sakuraba et al. 2020.
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Trait Class
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Tolerance and resistance - Stress tolerance
Character as QTL - Germination
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK108080
AK071020
AK104626
AK061745
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MSU ID
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LOC_Os02g36880.1
LOC_Os02g36880.2
LOC_Os02g36880.3
LOC_Os02g36880.4
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RAP ID
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Os02g0579000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Naithani S., Mohanty B., Elser J., D'Eustachio P., Jaiswal P.
Plants (Basel) 2023 12(11)
Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (<i>Oryza sativa</i>).
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Zhou S., Huang K., Zhou Y., Hu Y., Xiao Y., Chen T., Yin M., Liu Y., Xu M., Jiang X.
BMC Plant Biol. 2022 22(1) 269
Degradome sequencing reveals an integrative miRNA-mediated gene interaction network regulating rice seed vigor.
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Wang Y., Huang L., Du F., Wang J., Zhao X., Li Z., Wang W., Xu J., Fu B.
Sci Rep 2021 11(1) 5166
Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice.
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Sakuraba Y., Kim D., Han S.H., Kim S.H., Piao W., Yanagisawa S., An G., Paek N.C.
Plant Cell 2020 32(3) 630-649
Multilayered Regulation of Membrane-Bound ONAC054 Is Essential for Abscisic Acid-Induced leaf senescence in Rice.
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Guan S., Xu Q., Ma D., Zhang W., Xu Z., Zhao M., Guo Z.
Gene 2019 685 96-105
Transcriptomics profiling in response to cold stress in cultivated rice and weedy rice.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Fang Y., Xie K., Xiong L.
J. Exp. Bot. 2014 65(8) 2119-35
Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice.
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Garcia-Morales S.a, Gomez-Merino F.C.b, Trejo-Tellez L.I.a
Acta Physiologiae Plantarum 2014 36 1927-1936
NAC transcription factor expression, amino acid concentration and growth of elite rice cultivars upon salt stress
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Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009 2 217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
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Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008 280(6) 547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
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Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003 10(6) 239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
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Kikuchi,K., Ueguchi-Tanaka,M., Yoshida,K.T., Nagato,Y., Matsusoka,M. and Hirano,H.Y.
Mol. Gen. Genet. 2000 262(6) 1047-1051
Molecular analysis of the NAC gene family in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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regulation of transcription( GO:0045449 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to salt stress( GO:0009651 )
response to cold( GO:0009409 )
seed germination( GO:0009845 )
response to flooding( GO:0009413 )
response to gravity( GO:0009629 )
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Trait Ontology
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drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
submergence tolerance( TO:0000524 )
gravity response trait( TO:0002693 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
coleoptile emergence stage( PO:0007045 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Oct 11, 2023
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Update info.