Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HOX6 |
| Gene Symbol Synonym | Oshox6, OsHox6, OsHDZ33, OsHDZIP33, HDZ33, HDZIP33 |
| CGSNL Gene Name | HOMEOBOX GENE 6 |
| Gene Name Synonym | rice homeobox gene 6, Homeobox-leucine zipper protein HOX6, Homeodomain transcription factor HOX6, HD-ZIP protein HOX6, homeodomain-leucine zipper transcription factor 33, OsHDZIP transcription factor 33 |
| Protein Name | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX6 |
| Allele | |
| Chromosome No. | 9 |
| Explanation | EF555526, AF145730. Q9XH35(indica), Q651Z5(japonica). |
| Trait Class |
Tolerance and resistance - Stress tolerance
Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK103160
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| MSU ID |
LOC_Os09g35910.1
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| RAP ID |
Os09g0528200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022 9(8) The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
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Mohanty B.
Front Genet 2021 12 639654 Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
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Meijer,A.H., R.J., d'Erfurth,I., Shen,W. and Hoge,J.H.
Mol. Gen. Genet. 2000 263(1) 12-21 HD-Zip proteins of families I and II from rice: interactions and functional properties.
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| TextPresso Search | Search textpresso for HOX6 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to jasmonic acid stimulus( GO:0009753 )
response to deep water( GO:0030912 ) transcription( GO:0006350 ) sequence-specific DNA binding( GO:0043565 ) DNA binding( GO:0003677 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) regulation of transcription, DNA-dependent( GO:0006355 ) |
| Trait Ontology |
submergence tolerance( TO:0000524 )
jasmonic acid sensitivity( TO:0000172 ) |
| Plant Ontology |
leaf( PO:0025034 )
root( PO:0009005 ) inflorescence( PO:0009049 ) endosperm( PO:0009089 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Dec 16, 2022 | |
