Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HOX5
Gene Symbol Synonym Oshox5, OsHox5, EIP9
CGSNL Gene Name HOMEOBOX GENE 5
Gene Name Synonym rice homeobox gene 5, Homeobox-leucine zipper protein HOX5, Homeodomain transcription factor HOX5, HD-ZIP protein HOX5, EBR1-interacting protein 9
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX5
Allele
Chromosome No. 8
Explanation LOC_Os08g32085. LOC_Os08g32080. EF555525, AF145729. Q9XH36(indica), Q6ZA74(japonica).
Trait Class Seed
Other
Expression
Sequence/Locus
cDNA Accession No. AK100634
MSU ID LOC_Os08g32080.1
LOC_Os08g32085.1
RAP ID Os08g0416000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
You Q., Zhai K., Yang D., Yang W., Wu J., Liu J., Pan W., Wang J., Zhu X., Jian Y., Liu J., Zhang Y., Deng Y., Li Q., Lou Y., Xie Q., He Z.
Cell Host Microbe 2016  20(6)  758-769
An E3 Ubiquitin Ligase-BAG Protein Module Controls Plant Innate Immunity and Broad-Spectrum disease resistance.
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008  66(1-2)  87-103
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
Ye,R., Yao,Q.H., Xu,Z.H. and Xue,H.W.
Plant J. 2004  38(2)  348-357
Development of an efficient method for the isolation of factors involved in gene transcription during rice embryo development.
Meijer,A.H., R.J., d'Erfurth,I., Shen,W. and Hoge,J.H.
Mol. Gen. Genet. 2000  263(1)  12-21
HD-Zip proteins of families I and II from rice: interactions and functional properties.
TextPresso Search Search textpresso for HOX5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology embryo development trait( TO:0000620 )
seed development trait( TO:0000653 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 11, 2018


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