Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | FCA |
| Gene Symbol Synonym | OsFCA, OsFCA-1, OsFCA-2, OsFCA-3, OsFCA-4, OsFCA-gamma, RRM1-172, OsRRM1-172 |
| CGSNL Gene Name | OSFCA PROTEIN |
| Gene Name Synonym | OsFCA protein, RNA recognition motif domain protein 1-172 |
| Protein Name | OSFCA PROTEIN |
| Allele | |
| Chromosome No. | 9 |
| Explanation | homology with Arabidopsis FCA, flowering time control protein. AY274928, AY730687. AY311343, AY311344, AY331574. PO:0009051; spikelet ; PO:0009049; inflorescence ; PO:0009005; root ; PO:0006340; adult leaf. GRO:0007157; panicle development. |
| Trait Class |
Reproductive organ - Heading date
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK073225
|
| MSU ID |
LOC_Os09g03610.1
LOC_Os09g03610.2 LOC_Os09g03610.3 LOC_Os09g03610.4 |
| RAP ID |
Os09g0123200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024 12 e17668 Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
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Du,X., Qian,X., Wang,D. and Yang,J.
DNA Seq. 2006 17(1) 31-40 Alternative splicing and expression analysis of OsFCA (FCA in Oryza sativa L.), a gene homologous to FCA in Arabidopsis.
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Lu,Q., Xu,Z.K. and Song,R.T.
Acta Biochim. Biophys. Sin. (Shanghai) 2006 38(7) 492-499 OsFY, a homolog of AtFY, encodes a protein that can interact with OsFCA-gamma in rice (Oryza sativa L.).
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Lee,J.H., Cho,Y.S., Yoon,H.S., Suh,M.C., Moon,J., Lee,I., Weigel,D., Yun,C.H. and Kim,J.K.
Plant Mol. Biol. 2005 58(6) 823-838 Conservation and Divergence of FCA Function between Arabidopsis and Rice.
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| DB Reference | |
| Gramene ID | GR:0080002 |
| Ontologies | |
| Gene Ontology |
nucleus( GO:0005634 )
nuclear part( GO:0044428 ) RNA binding( GO:0003723 ) regulation of flower development( GO:0009909 ) nucleotide binding( GO:0000166 ) embryo sac development( GO:0009553 ) embryonic development( GO:0009790 ) chromatin silencing by small RNA( GO:0031048 ) |
| Trait Ontology |
days to heading( TO:0000137 )
primary branching of inflorescence( TO:0000052 ) |
| Plant Ontology |
adult vascular leaf( PO:0006340 )
root( PO:0009005 ) inflorescence( PO:0009049 ) spikelet( PO:0009051 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jan 14, 2025 | |
