Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CUC3
Gene Symbol Synonym OsCUC3, ONAC107, NAC107, DLN214, OsDLN214
Gene Name Synonym cup-shaped cotyledon 3, NAC domain-containing protein 107, CUP-SHAPED COTYLEDON3, DLN repressor 214, DLN motif protein 214
Protein Name
Allele oscuc3, oscuc3-1
Chromosome No. 8
Explanation the homolog of Arabidopsis CUC3. TO:0000748: leaf morphology trait. GO:1902182: shoot apical meristem development. PO:0025607: vegetative shoot system. PO:0030123: panicle inflorescence.
Trait Class Vegetative organ - Leaf
Seed - Morphological traits - Embryo
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. -
MSU ID LOC_Os08g40030.1
RAP ID Os08g0511200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Chang Z., Xu R., Xun Q., Liu J., Zhong T., Ding Y., Ding C.
Plant J. 2021  106(1)  41-55
OsmiR164-targeted OsNAM, a boundary gene, plays important roles in rice leaf and panicle development.
Wang J., Bao J., Zhou B., Li M., Li X., Jin J.
New Phytol. 2020   
The osa-miR164 target OsCUC1 functions redundantly with OsCUC3 in controlling rice meristem/organ boundary specification.
Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019  20(7) 
Analysis of Rice Proteins with DLN repressor Motif/S.
Deshpande G.M., Ramakrishna K., Chongloi G.L., Vijayraghavan U.
J. Exp. Bot. 2015  66(9)  2773-84
Functions for rice RFL in vegetative axillary meristem specification and outgrowth.
Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009  2  217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008  280(6)  547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
Hibara K., Nagato Y.
RGN 2006  23  96-97
OsNAM and OsCUC3 are expressed specifically in organ boundaries
K. Hibara and Y. Nagato
RGN 2005  22  83-85
Petunia NO APICAL MERISTEM ortholog, OsNAM, is expressed in the embryonic SAM and organ Boundary in rice.
TextPresso Search Search textpresso for CUC3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology leaf development( GO:0048366 )
post-embryonic development( GO:0009791 )
maintenance of shoot apical meristem identity( GO:0010492 )
organ boundary specification between lateral organs and the meristem( GO:0010199 )
regulation of transcription( GO:0045449 )
DNA binding( GO:0003677 )
embryonic meristem development( GO:0048508 )
embryonic development( GO:0009790 )
Trait Ontology stamen number( TO:0000225 )
shoot apical meristem development( TO:0006020 )
leaf development trait( TO:0000655 )
Plant Ontology plant embryo( PO:0009009 )
shoot apical meristem( PO:0020148 )
leaf( PO:0025034 )
root( PO:0009005 )
stem internode( PO:0020142 )
leaf sheath( PO:0020104 )
bract( PO:0009055 )
flag leaf( PO:0020103 )
inflorescence( PO:0009049 )
floral organ( PO:0025395 )
leaf development stage( PO:0001050 )
Related Strains
Phenotype images
Last updated
Jan 12, 2022