Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | CHIA1;175 |
| Gene Symbol Synonym | OsChia1;175, PC, Cht7, OsChia1d, Chia1d |
| CGSNL Gene Name | CLASS I CHITINASE |
| Gene Name Synonym | chitinase 1;175, pistil-specific chitinase, Chitinase7, Chitinase 7, Chitinase-7, Pathogenesis related (PR)-3 chitinase 7, Class I chitinase d, Class III chitinase homologues (cDNA)-3 |
| Protein Name | CLASS I CHITINASE |
| Allele | |
| Chromosome No. | 5 |
| Explanation | AB012855, AB018248. class I chitinase. PR-3 chitinase, pathogenesis related 3 chitinase. EC=3.2.1.14 Q9SAY3(indica). Q7Y1Z1(japonica). |
| Trait Class |
Biochemical character
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK071196
|
| MSU ID |
LOC_Os05g33150.1
|
| RAP ID |
Os05g0399700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Nakazaki T, Tsukiyama T, Okumoto Y, Kageyama D, Naito K, Inouye K, Tanisaka T.
Genome 2006 49(6) 619-30 Distribution, structure, organ-specific expression, and phylogenic analysis of the pathogenesis-related protein-3 chitinase gene family in rice (Oryza sativa L.).
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Takakura,Y., Ito,T., Saito,H., Inoue,T., Komari,T. and Kuwata,S.
Plant Mol. Biol. 2000 42(6) 883-897 Flower-predominant expression of a gene encoding a novel class I chitinase in rice (Oryza sativa L.).
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| DB Reference | |
| Gramene ID | GR:0061297,GR:0061244 |
| Ontologies | |
| Gene Ontology |
chitin catabolic process( GO:0006032 )
defense response( GO:0006952 ) chitin binding( GO:0008061 ) cell wall macromolecule catabolic process( GO:0016998 ) chitinase activity( GO:0004568 ) carbohydrate metabolic process( GO:0005975 ) endochitinase activity( GO:0008843 ) cytoplasmic membrane-bounded vesicle( GO:0016023 ) response to other organism( GO:0051707 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jul 21, 2015 | |
