|
Basic Information
|
|
CGSNL Gene Symbol
|
XA13
|
|
Gene Symbol Synonym
|
xa13, Xa13, Os8N3, Os-8N3, 8N3, OsSWEET11, SWEET11, OsSWEET11/Xa13, Xa13/Os8N3/SWEET11, Os8N3/Xa13, OsSWEET11/Os8N3, OsSWEET11a, SWEET11a
|
|
CGSNL Gene Name
|
XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13
|
|
Gene Name Synonym
|
Xanthomonas oryzae pv. oryzae resistance 13, Xanthomonas campestris pv. oryzae resistance-13, Xanthomonas oryzae pv. oryzae resistance-13, sugar will eventually be exported transporter 11
|
|
Protein Name
|
SUGAR TRANSPORTER SWEET11
|
|
Allele
|
ossweet11, ossweet11-2, ossweet11a-1, ossweet11a-2, osweet11a-3, osweet11a-4
|
|
Chromosome No.
|
8
|
|
Explanation
|
Q6YZF3. DQ421394, DQ421395, DQ421396. Recessive resistant gene to Philippine isolate 6 but susceptible to isolates 1, 2, 3, 4, and 5. [RGN5:5]. a member of the NODULIN3 (N3) gene family. host disease-susceptibility gene for bacterial blight. MtN3 gene family. GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. TO:0020101: starch mobilization. GO:1904982: sucrose transmembrane transport. TO:1000022: anther morphology trait. GO:0140403: effector-mediated suppression of host innate immune response. GO:1900425: negative regulation of defense response to bacterium.
|
|
Trait Class
|
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Seed - Morphological traits - Endosperm
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK106127
AK070510
|
|
MSU ID
|
LOC_Os08g42350.1
|
|
RAP ID
|
Os08g0535200
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Liu L., Li Y., Wang Q., Xu X., Yan J., Wang Y., Wang Y., Shah S.M.A., Peng Y., Zhu Z., Xu Z., Chen G.
Rice (N Y) 2024 17(1) 30
Constructed Rice Tracers Identify the Major Virulent Transcription Activator-Like Effectors of the Bacterial Leaf Blight Pathogen.
|
|
Wang X., Ju Y., Wu T., Kong L., Yuan M., Liu H., Chen X., Chu Z.
Plant Biotechnol. J. 2024 22(8) 2186-2200
The clade III subfamily of OsSWEETs directly suppresses rice immunity by interacting with OsHMGB1 and OsHsp20L.
|
|
Xu Z., Xu X., Li Y., Liu L., Wang Q., Wang Y., Wang Y., Yan J., Cheng G., Zou L., Zhu B., Chen G.
Plant Commun 2023 100721
Tal6b/AvrXa27A, a Hidden TALE Targeting both the Susceptibility Gene OsSWEET11a and the Resistance Gene Xa27 in Rice.
|
|
Sun C., Wang Y., Yang X., Tang L., Wan C., Liu J., Chen C., Zhang H., He C., Liu C., Wang Q., Zhang K., Zhang W., Yang B., Li S., Zhu J., Sun Y., Li W., Zhou Y., Wang P., Deng X.
Plant Biotechnol. J. 2023 21(3) 621-634
MATE transporter GFD1 cooperates with sugar transporters, mediates carbohydrate partitioning and controls grain-filling duration, grain size and number in rice.
|
|
Wu L.B., Eom J.S., Isoda R., Li C., Char S.N., Luo D., Schepler-Luu V., Nakamura M., Yang B., Frommer W.B.
New Phytol. 2022 234(3) 975-989
OsSWEET11b, a potential sixth leaf blight susceptibility gene involved in sugar transport-dependent male fertility.
|
|
Tonosaki K., Ono A., Kunisada M., Nishino M., Nagata H., Sakamoto S., Kijima S.T., Furuumi H., Nonomura K.I., Sato Y., Ohme-Takagi M., Endo M., Comai L., Hatakeyama K., Kawakatsu T., Kinoshita T.
Plant Cell 2021 33(1) 85-103
Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice.
|
|
Xu X., Xu Z., Ma W., Haq F., Li Y., Shah S.M.A., Zhu B., Zhu C., Zou L., Chen G.
J. Exp. Bot. 2021 72(8) 3249-3262
TALE-triggered and iTALE-suppressed Xa1-mediated resistance to bacterial blight is independent of rice transcription factor subunits OsTFIIAgamma1 or OsTFIIAgamma5.
|
|
Ren Y., Huang Z., Jiang H., Wang Z., Wu F., Xiong Y., Yao J.
J. Exp. Bot. 2021 72(8) 2947-2964
A heat stress responsive NAC transcription factor heterodimer plays key roles in rice grain filling.
|
|
Hu L., Tu B., Yang W., Yuan H., Li J., Guo L., Zheng L., Chen W., Zhu X., Wang Y., Qin P., Ma B., Li S.
Plant Physiol. 2020 183(3) 1073-1087
Mitochondria-Associated pyruvate kinase Complexes Regulate Grain Filling in Rice.
|
|
Bian H., Zhang L., Chen L., Wang W., Ji H., Dong H.
J. Biosci. 2019 44(4)
Real-time monitoring of translocation of selected type-III effectors from <i>Xanthomonas oryzae</i> pv. <i>oryzae</i> into rice cells.
|
|
Li P., Zhang L., Mo X., Ji H., Bian H., Hu Y., Majid T., Long J., Pang H., Tao Y., Ma J., Dong H.
J. Exp. Bot. 2019 70(12) 3057-3073
Rice aquaporin PIP1;3 and harpin Hpa1 of bacterial blight pathogen cooperate in a type III effector translocation.
|
|
Zhang L., Chen L., Dong H.
Front Plant Sci 2019 10 632
Plant Aquaporins in Infection by and Immunity Against Pathogens - A Critical Review.
|
|
Hui S., Shi Y., Tian J., Wang L., Li Y., Wang S., Yuan M.
Mol. Plant Pathol. 2019 20(4) 519-532
TALE-carrying bacterial pathogens trap host nuclear import receptors for facilitation of infection of rice.
|
|
Li S., Tian Y., Wu K., Ye Y., Yu J., Zhang J., Liu Q., Hu M., Li H., Tong Y., Harberd N.P., Fu X.
Nature 2018 560(7720) 595-600
Modulating plant growth-metabolism coordination for sustainable agriculture.
|
|
Yang J., Luo D., Yang B., Frommer W.B., Eom J.S.
New Phytol. 2018 218(2) 604-615
SWEET11 and 15 as key players in seed filling in rice.
|
|
Li X., Wang Y., Duan E., Qi Q., Zhou K., Lin Q., Wang D., Wang Y., Long W., Zhao Z., Cheng Z., Lei C., Zhang X., Guo X., Wang J., Wu C., Jiang L., Wang C., Wan J.
Plant Cell Rep. 2018 37(2) 329-346
OPEN GLUME1: a key enzyme reducing the precursor of JA, participates in carbohydrate transport of lodicules during anthesis in rice.
|
|
Wu Y., Lee S.K., Yoo Y., Wei J., Kwon S.Y., Lee S.W., Jeon J.S., An G.
Mol Plant 2018 11(6) 833-845
Rice Transcription Factor OsDOF11 Modulates Sugar Transport by Promoting Expression of Sucrose Transporter and SWEET Genes.
|
|
Wang M., Zhang T., Peng H., Luo S., Tan J., Jiang K., Heng Y., Zhang X., Guo X., Zheng J., Cheng Z.
Front Plant Sci 2018 9 560
Rice <i>Premature leaf senescence 2</i>, Encoding a Glycosyltransferase (GT), Is Involved in leaf senescence.
|
|
Ma W., Zou L., Zhiyuan J.I., Xiameng X.U., Zhengyin X.U., Yang Y., Alfano J.R., Chen G.
Mol. Plant Pathol. 2018 19(10) 2248-2262
Xanthomonas oryzae pv. oryzae TALE proteins recruit OsTFIIAgamma1 to compensate for the absence of OsTFIIAgamma5 in bacterial blight in rice.
|
|
Zhu X., Shen W., Huang J., Zhang T., Zhang X., Cui Y., Sang X., Ling Y., Li Y., Wang N., Zhao F., Zhang C., Yang Z., He G.
Plant Cell Physiol. 2018 59(3) 487-499
Mutation of the OsSAC1 Gene, which Encodes an Endoplasmic Reticulum Protein with an Unknown Function, Causes Sugar Accumulation in Rice Leaves.
|
|
Zhang L, Hu Y, Li P, Wang X, Dong H
Australasian Plant Pathology 2018 48(11)
Silencing of an aquaporin gene diminishes bacterial blight disease in rice
|
|
Huang R., Hui S., Zhang M., Li P., Xiao J., Li X., Yuan M., Wang S.
Front Plant Sci 2017 8 1919
A Conserved Basal Transcription Factor Is Required for the Function of Diverse TAL Effectors in Multiple Plant Hosts.
|
|
Jiang G., Yin D., Zhao J., Chen H., Guo L., Zhu L., Zhai W.
Sci Rep 2016 6 26104
The rice thylakoid membrane-bound ascorbate peroxidase OsAPX8 functions in tolerance to bacterial blight.
|
|
Denancé N., Szurek B., Noël LD.
Plant Cell Physiol. 2014 55(3) 469-74
Emerging functions of nodulin-like proteins in non-nodulating plant species.
|
|
Yuan M., Zhao J., Huang R., Li X., Xiao J., Wang S.
J Integr Plant Biol 2014 56(6) 559-70
Rice MtN3/saliva/SWEET gene family: Evolution, expression profiling, and sugar transport.
|
|
Verdier V., Triplett L.R., Hummel A.W., Corral R., Cernadas R.A., Schmidt C.L., Bogdanove A.J., Leach J.E.
New Phytol. 2012 196(4) 1197-207
Transcription activator-like (TAL) effectors targeting OsSWEET genes enhance virulence on diverse rice (Oryza sativa) varieties when expressed individually in a TAL effector-deficient strain of Xanthomonas oryzae.
|
|
Salgotra R.K., Gupta B.B., Millwood R.J., Balasubramaniam M., Stewart Jr.
Euphytica 2012 187(3) 313-323
Introgression of bacterial leaf blight resistance and aroma genes using functional marker-assisted selection in rice (Oryza sativa L.)
|
|
Chen L.Q., Qu X.Q., Hou B.H., Sosso D., Osorio S., Fernie A.R., Frommer W.B.
Science 2012 335(6065) 207-11
Sucrose efflux mediated by SWEET proteins as a key step for phloem transport.
|
|
Yuan T. , Li X. , Xiao J. , Wang S.
Mol Plant 2011 4(2) 300-9
Characterization of Xanthomonas oryzae-responsive cis-acting element in the promoter of rice race-specific susceptibility gene Xa13.
|
|
Rajpurohit D., Kumar R., Kumar M., Paul P., Awasthi A., Osman Basha P., Puri A., Jhang T., Singh K., Dhaliwal H.S.
Euphytica 2011 178 111-126
Pyramiding of two bacterial blight resistance and a semidwarfing gene in Type 3 Basmati using marker-assisted selection
|
|
Antony G., Zhou J., Huang S., Li T., Liu B., White F., Yang B.
Plant Cell 2010 22(11) 3864-3876
Rice xa13 recessive resistance to bacterial blight is defeated by induction of the disease susceptibility gene Os-11N3.
|
|
Yuan,M., Chu,Z., Li,X., Xu,C. and Wang,S.
Plant Cell 2010 22(9) 3164-3176
The Bacterial Pathogen Xanthomonas oryzae Overcomes Rice Defenses by Regulating Host Copper Redistribution
|
|
Frank F White, Yang B.
Plant physiology 2009 150(4) 1677-86
Host and pathogen factors controlling the rice-Xanthomonas oryzae interaction.
|
|
Yuan M,Chu Z,Li X,Xu C,Wang S
Plant Cell Physiol. 2009 50 947-55
Pathogen-induced expressional loss of function is the key factor in race-specific bacterial resistance conferred by a recessive R gene xa13 in rice.
|
|
Sugio A,Yang B,Zhu T,White FF
Proc. Natl. Acad. Sci. U.S.A. 2007 104 10720-5
Two type III effector genes of Xanthomonas oryzae pv. oryzae control the induction of the host genes OsTFIIAgamma1 and OsTFX1 during bacterial blight of rice.
|
|
Nino-Liu, D.O., P.C. Ronald and A.J. Bogdanove
Mol. Plant Pathol. 2006 7(5) 303-324
Pathogen profile Xanthomonas oryzae pathovars: model pathogens of a model crop.
|
|
Yang B, Sugio A, White FF.
Proc. Natl. Acad. Sci. U.S.A. 2006 103(27) 10503-10508
Os8N3 is a host disease-susceptibility gene for bacterial blight of rice.
|
|
Chu Z, Fu B, Yang H, Xu C, Li Z, Sanchez A, Park YJ, Bennetzen JL, Zhang Q, Wang S.
Theor. Appl. Genet. 2006 112(3) 455-461
Targeting xa13, a recessive gene for bacterial blight resistance in rice.
|
|
Chu,Z., Yuan,M., Yao,J., Ge,X., Yuan,B., Xu,C., Li,X., Fu,B., Li,Z., Bennetzen,J.L., Zhang,Q. and Wang,S.
Genes Dev. 2006 20(10) 1250-1255
Promoter mutations of an essential gene for pollen development result in disease resistance in rice.
|
|
Chu Z, Ouyang Y, Zhang J, Yang H, Wang S.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2004 271(1) 111-120
Genome-wide analysis of defense-responsive genes in bacterial blight resistance of rice mediated by the recessive R gene xa13.
|
|
Muralidharan, K., D. Krishnaveni, G.S. Laha, C.S. Reddy, M. Srinivasprasad and R. Sridhar
RGN 2003 20 96-98
Appraisal of bacterial leaf blight resistance genes in India.
|
|
Lee, K.S., E.R. Angeles and G.S. Khush
RGN 2000 17 73-74.
Inheritance of resistance to race 6 of bacterial blight in rice.
|
|
Sanchez, A.C., L.L. Ilag, D. Yang, D.S. Brar, F. Ausubel, G.S. Khush, M. Yano, T. Sasaki, Z. Li and N. Huang
Theor. Appl. Genet. 1999 98 1022-1028
Genetic and physical mapping of xa13, a recessive bacterial blight resistance gene in rice.
|
|
Huang, N., A. Parco, T. Mew, G. Magpantay, S. McCouch, E. Guiderdoni, J. Xu, P. Subudhi, E.R. Angeles and G.S. Khush
Molecular Breeding 1997 3 105-113.
RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population.
|
|
Taura, S., M. Asahiro and F. Shimotu
Breeding Science 1997 47(Suppl. 1) 269
Reaction of F2 population from the cross of BJ1/IR24 to the Japanese bacterial blight pathogens.
|
|
Huang, N., E.R. Angeles, J. Domingo, G. Magpantay, S. Singh, G. Zhang, N. Kumaravadivel, J. Bennett and G.S. Khush
Theor. Appl. Genet. 1997 95 313-320.
Pyramiding of bacterial blight resistance genes in rice marker-assisted selection using RFLP and PCR.
|
|
Zhang, G., E.R. Angeles, M.L.P. Abenes, G.S. Khush and N. Huang
Theor. Appl. Genet. 1996 93 65-70.
RAPD and RFLP mapping of the bacterial blight resistance gene xa-13 in rice.
|
|
Zhang, G., E.R. Angeles, M.L.P. Abenes, G.S. Khush and N. Huang
RGN 1994 11 142-144.
Molecular mapping of a bacterial blight resistance gene on chromosome 8 in rice.
|
|
Mir, G.N. and G.S. Khush
Indian J. Genet. & Plant Breed. 1991 51(1) 72-78.
Genetics of resistance to bacterial blight in rice (Oryza sativa L.).
|
|
Sahu, R.K. and G.S. Khush
Plant Breeding 1989 102(3) 232-236.
Genetics of resistance to four races of Xanthomonas campestris pv. oryzae in some rice cultivars.
|
|
Kinoshita, T.
RGN 1988 5 3-6.
I. Registration of new gene symbols.
|
|
Ogawa, T., L. Lin, R.E. Tabien and G.S. Khush
RGN 1987 4 98-100.
A new recessive gene for resistance to bacterial blight of rice.
|
|
TextPresso Search
|
Search textpresso for XA13
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
GR:0061021
|
|
Ontologies
|
|
Gene Ontology
|
pollen development( GO:0009555 )
integral to membrane( GO:0016021 )
response to bacterium( GO:0009617 )
protein binding( GO:0005515 )
endosperm development( GO:0009960 )
seed maturation( GO:0010431 )
sucrose transmembrane transporter activity( GO:0008515 )
sugar transmembrane transporter activity( GO:0051119 )
defense response( GO:0006952 )
copper ion transport( GO:0006825 )
phloem loading( GO:0009915 )
carbohydrate transmembrane transport( GO:0034219 )
sucrose transport( GO:0015770 )
plasma membrane( GO:0005886 )
integral to plasma membrane( GO:0005887 )
leaf senescence( GO:0010150 )
defense response to bacterium( GO:0042742 )
response to salt stress( GO:0009651 )
response to molecule of bacterial origin( GO:0002237 )
|
|
Trait Ontology
|
leaf area( TO:0000540 )
yield trait( TO:0000371 )
salt tolerance( TO:0006001 )
leaf senescence( TO:0000249 )
seed maturation( TO:0002661 )
starch content( TO:0000696 )
endosperm related trait( TO:0000575 )
bacterial blight disease resistance( TO:0000175 )
aborted uni-nucleate stage( TO:0000060 )
spikelet fertility( TO:0000180 )
pollen fertility( TO:0000421 )
seed set percent( TO:0000455 )
|
|
Plant Ontology
|
leaf margin( PO:0020128 )
leaf apex( PO:0020137 )
anther( PO:0009066 )
seed maturation stage( PO:0007632 )
nucellus( PO:0020020 )
nucellar projection( PO:0008007 )
nucellar epidermis( PO:0008006 )
aleurone layer( PO:0005360 )
4 leaf senescence stage( PO:0001054 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Sep 17, 2024
|
Update info.
Click here for feedback