Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol D17
Gene Symbol Synonym d17(t), dwf14, d17, htd1, OsCCD7, CCD7, D17/HTD1, HTD1, OsD17
CGSNL Gene Name DWARF SLENDER DWARF, TILLERING
Gene Name Synonym slender dwarf, tillering dwarf, dwarf-17, high-tillering dwarf1, high-tillering dwarf 1, High-Tillering Dwarf1, High-Tillering Dwarf 1, catotenoid dioxygenase 7, carotenoid-cleaving dioxygenase 7, carotenoid cleavage dioxygenase 7, MAX3 ortholog
Protein Name CATOTENOID DIOXYGENASE 7
Allele d17, d17-1, d17-2, ccd7, ccd7c1, ccd7c2, ccd7c3, ccd7c4, ccd7c5, ccd7c6, ccd7c7, ccd7c8, ccd7c9, ccd7c10
Chromosome No. 4
Explanation Similar to "bunketsu-waito". Profuse tillering with slender leaves. [10003] AL663000. Q7XU29. GO:1901601: strigolactone biosynthetic process. GO:1901698: response to nitrogen compound. TO:0006064: rolled leaf. TO:0006044: magnesium content. TO:0006047: calcium content trait.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Pollination, fertilization, fertility
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK109771
MSU ID LOC_Os04g46470.1
RAP ID Os04g0550600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Mostofa M.G., Ha C.V., Rahman M.M., Nguyen K.H., Keya S.S., Watanabe Y., Itouga M., Hashem A., Abd Allah EF., Fujita M., Tran L.P.
Antioxidants (Basel) 2021  10(11) 
Strigolactones Modulate Cellular Antioxidant Defense Mechanisms to Mitigate Arsenate Toxicity in Rice Shoots.
Shindo M., Yamamoto S., Shimomura K., Umehara M.
Front Plant Sci 2020  11  135
Strigolactones Decrease leaf angle in Response to Nutrient Deficiencies in Rice.
Zheng J., Hong K., Zeng L., Wang L., Kang S., Qu M., Dai J., Zou L., Zhu L., Tang Z., Meng X., Wang B., Hu J., Zeng D., Zhao Y., Cui P., Wang Q., Qian Q., Wang Y., Li J., Xiong G.
Plant Cell 2020  32(9)  2780-2805
Karrikin Signaling Acts Parallel to and Additively with Strigolactone Signaling to Regulate Rice Mesocotyl Elongation in Darkness.
Choi J., Lee T., Cho J., Servante E.K., Pucker B., Summers W., Bowden S., Rahimi M., An K., An G., Bouwmeester H.J., Wallington E.J., Oldroyd G., Paszkowski U.
Nat Commun 2020  11(1)  2114
The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in rice.
Liang J., He Y., Zhang Q., Wang W., Zhang Z.
Int J Mol Sci 2020  21(3) 
Plasma Membrane Ca2+ Permeable Mechanosensitive Channel <i>Osdmt1</i> Is Involved in Regulation of Plant Architecture and Ion Homeostasis in Rice.
Wang J., Lu K., Nie H., Zeng Q., Wu B., Qian J., Fang Z.
Rice (N Y) 2018  11(1)  12
Rice nitrate transporter OsNPF7.2 positively regulates tiller number and grain yield.
Wang Y.P., Tang S.Q., Chen H.Z., Wu Z.F., Zhang H., Duan E.C., Shi Q.H., Wu Z.M.
Plant Biol (Stuttg) 2017   
Identification and molecular mapping of indica high-tillering dwarf mutant htd4, a mild phenotype allelic mutant of D14 in rice (Oryza sativa L.).
Yang X., Chen L., He J., Yu W.
Plant Cell Rep. 2017   
Knocking out of carotenoid catabolic genes in rice fails to boost carotenoid accumulation, but reveals a mutation in strigolactone biosynthesis.
Xu J., Zha M., Li Y., Ding Y., Chen L., Ding C., Wang S.
Plant Cell Rep. 2015  34(9)  1647-62
The interaction between nitrogen availability and auxin, cytokinin, and strigolactone in the control of shoot branching in rice (Oryza sativa L.).
Priya R., Siva R.
Gene 2014  548  223-233
Phylogenetic analysis and evolutionary studies of plant carotenoid cleavage dioxygenase gene
Liang W., Shang F., Lin Q., Lou C., Zhang J.
Gene 2014  537(1)  1-5
Tillering and panicle branching genes in rice.
Challis R.J., Hepworth J., Mouchel C., Waites R., Leyser O.
Plant Physiol. 2013  161(4)  1885-902
A Role for MORE AXILLARY GROWTH1 (MAX1) in Evolutionary Diversity in Strigolactone Signaling Upstream of MAX2.
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013  16(2)  213-20
Genes offering the potential for designing yield-related traits in rice.
Koumoto T.a, Shimada H.a b, Kusano H.a, She K.C.b, Iwamoto M.c, Takano M.c
Plant Biotechnology 2013  30  47-56
Rice monoculm mutation moc2, which inhibits outgrowth of the second tillers, is ascribed to lack of a fructose-1,6-bisphosphatase
Gutjahr,C., Radovanovic,D., Geoffroy,J., Zhang,Q., Siegler,H., Chiapello,M., Casieri,L., An,K., An,G., Guiderdoni,E., Kumar Chellian,S., Sundaresan,V., Harrison,M.J. and Paszkowski,U.
Plant J. 2011   
The half-size ABC transporters STR1 and 2 are indispensable for mycorrhizal arbuscule formation in rice
Mizutani M., Ohta D.
Annu Rev Plant Biol 2010  61  291-315
Diversification of P450 genes during land plant evolution.
Minakuchi K., Kameoka H., Yasuno N., Umehara M., Luo L., Kobayashi K., Hanada A., Ueno K., Asami T., Yamaguchi S., KYOZUKA J.
Plant Cell Physiol. 2010  51(7)  1127-35
FINE culm1 (FC1) works downstream of strigolactones to inhibit the outgrowth of axillary buds in rice.
Gao Z,Qian Q,Liu X,Yan M,Feng Q,Dong G,Liu J,Han B
Plant Mol. Biol. 2009  71(3)  265-76
Dwarf 88, a novel putative esterase gene affecting architecture of rice plant.
Umehara M., Hanada A., Yoshida S., Akiyama K., Arite T., Noriko Takeda-Kamiya, Magome H., Kamiya Y., Shirasu K., Yoneyama K., KYOZUKA J., Yamaguchi S.
Nature 2008  455(7210)  195-200
Inhibition of shoot branching by new terpenoid plant hormones.
Arite T, Iwata H, Ohshima K, Maekawa M, Nakajima M, Kojima M, Sakakibara H, Kyozuka J.
Plant J. 2007  51(6)  1019-1029
DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.
Zou J, Zhang S, Zhang W, Li G, Chen Z, Zhai W, Zhao X, Pan X, Xie Q, Zhu L.
Plant J. 2006  48(5)  687-696
The rice HIGH-TILLERING DWARF1 encoding an ortholog of Arabidopsis MAX3 is required for negative regulation of the outgrowth of axillary buds.
Ishikawa S, Maekawa M, Arite T, Onishi K, Takamure I, Kyozuka J.
Plant Cell Physiol. 2005  46(1)  79-86
Suppression of Tiller Bud Activity in Tillering Dwarf Mutants of Rice
Onishi, K., I. Takamure and H. Nakashima
RGN 2000  17  22-24
The tiller development affected by d17 (tillering dwarf) in relation to the yield stability
Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984    187-274.
Gene analysis and linkage map.
Takahashi, M. and T. Kinoshita
Res. Bull. Univ. Farm Hokkaido Univ. 1974  19  41-50.
Genic identification on the forms of the tillering dwarf rice. -Genetical studies on rice plant, LIX-.
TextPresso Search Search textpresso for D17 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060197,GR:0080027
Ontologies
Gene Ontology response to arsenic( GO:0046685 )
metal ion binding( GO:0046872 )
response to starvation( GO:0042594 )
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen( GO:0016702 )
secondary shoot formation( GO:0010223 )
multicellular organismal development( GO:0007275 )
chloroplast( GO:0009507 )
response to auxin stimulus( GO:0009733 )
carotene catabolic process( GO:0016121 )
9-cis-epoxycarotenoid dioxygenase activity( GO:0045549 )
response to cytokinin stimulus( GO:0009735 )
Trait Ontology leaf shape( TO:0000492 )
panicle type( TO:0000089 )
leaf width( TO:0000370 )
stem length( TO:0000576 )
panicle number( TO:0000152 )
nitrogen sensitivity( TO:0000011 )
cytokinin sensitivity( TO:0000167 )
auxin sensitivity( TO:0000163 )
spikelet fertility( TO:0000180 )
plant height( TO:0000207 )
tiller number( TO:0000346 )
leaf lamina joint bending( TO:0002688 )
hydrogen peroxide content( TO:0000605 )
relative chlorophyll content( TO:0001016 )
relative water content( TO:0000136 )
leaf color( TO:0000326 )
Plant Ontology basal axillary shoot system( PO:0005001 )
bundle sheath( PO:0006023 )
root( PO:0009005 )
stem( PO:0009047 )
axillary bud( PO:0004709 )
inflorescence( PO:0009049 )
vascular leaf( PO:0009025 )
shoot system( PO:0009006 )
Related Strains
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Phenotype images
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Last updated
May 26, 2022


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