Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GS2
Gene Symbol Synonym OsGS2, GLN2, OsGLN2, RGS31, OsRGS31
Gene Name Synonym "Glutamine synthetase, chloroplastic", plastidic/chloroplastic glutamine synthase, glutamine synthetase 2, "Glutamate:ammonia ligase delta, chloroplast", chloroplastic gluthamine synthetase 2
Chromosome No. 4
Explanation EC= Glutamate--ammonia ligase. P14655. X14246. D16071. TO:0000794: axillary bud prominence. TO:0000791: axillary bud size. PO:0030123: panicle inflorescence.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK065491
MSU ID LOC_Os04g56400.1
RAP ID Os04g0659100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Jardim-Messeder D., Caverzan A., Balbinott N., Menguer P.K., Paiva A.L.S., Lemos M., Cunha J.R., Gaeta M.L., Costa M., Zamocky M., Saibo N.J.M., Silveira J.A.G., Margis R., Margis-Pinheiro M.
Antioxidants (Basel) 2023  12(2) 
Stromal Ascorbate Peroxidase (<i>OsAPX7</i>) Modulates Drought Stress Tolerance in Rice (<i>Oryza sativa</i>).
Gao J., Ge S., Wang H., Fang Y., Sun L., He T., Cheng X., Wang D., Zhou X., Cai H., Li C., Liu Y., E Y., Meng J., Chen W.
Front Plant Sci 2023  14  1131937
Biochar-extracted liquor stimulates nitrogen related gene expression on improving nitrogen utilization in rice seedling.
Cui X., He H., Hu S., Zhang B., Cai H.
Plants (Basel) 2022  11(19) 
Synergistic Interaction between Copper and Nitrogen-Uptake, Translocation, and Distribution in Rice Plant.
Ji C., Li J., Jiang C., Zhang L., Shi L., Xu F., Cai H.
Journal of Advanced Research 2022  35  187-198
Zinc and nitrogen synergistic act on root-to-shoot translocation and preferential distribution in rice.
Yang G., Wei X., Fang Z.
Front Plant Sci 2022  13  900262
Melatonin Mediates axillary bud Outgrowth by Improving Nitrogen Assimilation and Transport in Rice.
Zheng Y., Zhang S., Luo Y., Li F., Tan J., Wang B., Zhao Z., Lin H., Zhang T., Liu J., Liu X., Guo J., Xie X., Chen L., Liu Y.G., Chu Z.
Plant Commun 2022  3(6)  100412
Rice OsUBR7 modulates plant height by regulating histone H2B monoubiquitination and cell proliferation.
Gao Y., Ning Q., Yang Y., Liu Y., Niu S., Hu X., Pan H., Bu Z., Chen N., Guo J., Yu J., Cao L., Qin P., Xing J., Liu B., Liu X., Zhu Y.
MBio 2021  12(4)  e0156621
Endophytic <i>Streptomyces hygroscopicus</i> OsiSh-2-Mediated Balancing between Growth and disease resistance in Host Rice.
Wang B., Xie G., Liu Z., He R., Han J., Huang S., Liu L., Cheng X.
Front Plant Sci 2019  10  759
Mutagenesis Reveals That the <i>OsPPa6</i> Gene Is Required for Enhancing the Alkaline Tolerance in Rice.
Sousa R.H.V., Carvalho F.E.L., Lima-Melo Y., Alencar VTCB., Daloso D.M., Margis-Pinheiro M., Komatsu S., Silveira J.A.G.
J. Exp. Bot. 2019  70(2)  627-639
Impairment of peroxisomal APX and CAT activities increases protection of photosynthesis under oxidative stress.
James D., Borphukan B., Fartyal D., Ram B., Singh J., Manna M., Sheri V., Panditi V., Yadav R., Achary V.M.M., Reddy M.K.
Front Plant Sci 2018  9  786
Concurrent Overexpression of <i>OsGS1;1</i> and <i>OsGS2</i> Genes in Transgenic Rice (<i>Oryza sativa</i> L.): Impact on Tolerance to Abiotic Stresses.
Sade N., Umnajkitikorn K., Rubio Wilhelmi MDM., Wright M., Wang S., Blumwald E.
J. Exp. Bot. 2018  69(4)  867-878
Delaying chloroplast turnover increases water-deficit stress tolerance through the enhancement of nitrogen assimilation in rice.
Li S., Tian Y., Wu K., Ye Y., Yu J., Zhang J., Liu Q., Hu M., Li H., Tong Y., Harberd N.P., Fu X.
Nature 2018  560(7720)  595-600
Modulating plant growth-metabolism coordination for sustainable agriculture.
Zhang Y., Tan L., Zhu Z., Yuan L., Xie D., Sun C.
Plant J. 2014   
TOND1 confers tolerance to nitrogen deficiency in rice.
Yang B.a, Wang X.M.a, Ma H.Y.a, Jia Y.a, Li X.b, Dai C.C.a
Plant Growth Regul. 2014  73  165-179
Effects of the fungal endophyte Phomopsis liquidambari on nitrogen uptake and metabolism in rice
Wang H., Wu Z., Han J., Zheng W., Yang C.
PLoS ONE 2012  7(5)  e37817
Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants.
Wang H., Zhang M., Guo R., Shi D., Liu B., Lin X., Yang C.
BMC Plant Biol. 2012  12  194
Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.).
Wang H., Ahan J., Wu Z., Shi D., Liu B., Yang C.
Plant Soil 2012  355  131-147
Alteration of nitrogen metabolism in rice variety 'Nipponbare' induced by alkali stress
Kusano M,Tabuchi M,Fukushima A,Funayama K,Diaz C,Kobayashi M,Hayashi N,Tsuchiya YN,Takahashi H,Kamata A,Yamaya T,Saito K
Plant J. 2011  66(3)  456-66
Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice.
Obara M., Takeda T., Hayakawa T., Yamaya T.
Soil Science and Plant Nutrition 2011  57  80-92
Mapping quantitative trait loci controlling root length in rice seedlings grown with low or sufficient NH+4 supply using backcross recombinant lines derived from a cross between Oryza sativa L. and Oryza glaberrima Steud
Hoshida H, Tanaka Y, Hibino T, Hayashi Y, Tanaka A, Takabe T, Takabe T.
Plant Mol. Biol. 2000  43(1)  103-111
Enhanced tolerance to salt stress in transgenic rice that overexpresses chloroplast glutamine synthetase.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Sakamoto,A., Ogawa,M., Masumura,T., Shibata,D., Takeba,G., Tanaka,K. and Fujii,S.
Plant Mol. Biol. 1989  13(5)  611-614
Three cDNA sequences coding for glutamine synthetase polypeptides in Oryza sativa L.
TextPresso Search Search textpresso for GS2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to nutrient( GO:0007584 )
response to copper ion( GO:0046688 )
response to amino acid stimulus( GO:0043200 )
response to hormone stimulus( GO:0009725 )
nitrogen compound metabolic process( GO:0006807 )
response to zinc ion( GO:0010043 )
response to symbiotic bacterium( GO:0009609 )
response to cadmium ion( GO:0046686 )
plastid( GO:0009536 )
glutamate-ammonia ligase activity( GO:0004356 )
ATP binding( GO:0005524 )
glutamine biosynthetic process( GO:0006542 )
chloroplast( GO:0009507 )
chloroplast thylakoid membrane( GO:0009535 )
cytosolic ribosome( GO:0022626 )
mitochondrion( GO:0005739 )
nitrogen fixation( GO:0009399 )
chloroplast stroma( GO:0009570 )
response to salt stress( GO:0009651 )
chloroplast envelope( GO:0009941 )
apoplast( GO:0048046 )
response to water deprivation( GO:0009414 )
response to osmotic stress( GO:0006970 )
response to herbicide( GO:0009635 )
response to alkalinity( GO:0010446 )
Trait Ontology drought tolerance( TO:0000276 )
osmotic response sensitivity( TO:0000095 )
salt tolerance( TO:0006001 )
glufosinate sensitivity( TO:0005007 )
proline content( TO:0006002 )
alkali sensitivity( TO:0000481 )
zinc sensitivity( TO:0000351 )
plant growth hormone sensitivity( TO:0000401 )
copper sensitivity( TO:0000021 )
nutrient sensitivity( TO:0000480 )
Plant Ontology root tip( PO:0000025 )
lateral root( PO:0020121 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
root cortex( PO:0000258 )
parenchyma( PO:0005421 )
root vascular system( PO:0003011 )
root( PO:0009005 )
stem base( PO:0008039 )
Related Strains
Phenotype images
Last updated
Sep 13, 2023