Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GLR3.1
Gene Symbol Synonym OsGLR3.2, GLR3.2, OsGLR3.1, OsGLR4.1, GLR4.1
Gene Name Synonym Glutamate receptor 3.1, Ligand-gated ion channel 3.1, Glutamate receptor homolog 3.2, GLUTAMATE RECEPTOR-LIKE 3.1, Glutamate receptor 4.1, Glutamate-like receptor 4.1
Allele GLR3.1-1, GLR3.1-2, osglr4.1-1, osglr4.1-2, osglr4.1-3
Chromosome No. 4
Explanation GLUTAMATE RECEPTOR-LIKE GENE, glutamate receptor-like gene. Q7XP59. OsGLR3.2 in Singh et al. 2013. OsGLR4.1 in Shi et al. 2022, Zeng et al. 2023. GO:1990170: stress response to cadmium ion.
Trait Class Biochemical character
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - panicle
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
cDNA Accession No. AK099753
MSU ID LOC_Os04g49570.1
RAP ID Os04g0585200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zeng W., Li H., Zhang F., Wang X., Rehman S., Huang S., Zhang C., Wu F., Li J., Lv Y., Zhang C., Li M., Li Z., Shi Y.
Front Plant Sci 2023  14  1236251
Functional characterization and allelic mining of <i>OsGLR</i> genes for potential uses in rice improvement.
Shi Y., Zeng W., Xu M., Li H., Zhang F., Chen Z., Anicet G., Huang S., Huang Y., Wang X., Li J., Zhang X., Zheng Y., Rehman S.
Curr Issues Mol Biol 2022  44(12)  6404-6427
Comprehensive Analysis of Glutamate Receptor-like Genes in Rice (<i>Oryza sativa</i> L.): Genome-Wide Identification, Characteristics, Evolution, Chromatin Accessibility, gcHap Diversity, Population Variation and Expression Analysis.
Zhao Y., Yin Z., Wang X., Jiang C., Aslam M.M., Gao F., Pan Y., Xie J., Zhu X., Dong L., Liu Y., Zhang H., Li J., Li Z.
Sci Rep 2021  11(1)  13769
Genetic basis and network underlying synergistic roots and shoots biomass accumulation revealed by genome-wide association studies in rice.
Ni J., Yu Z., Du G., Zhang Y., Taylor J.L., Shen C., Xu J., Liu X., Wang Y., Wu Y.
Rice (N Y) 2016  9(1)  9
Heterologous Expression and Functional Analysis of Rice GLUTAMATE RECEPTOR-LIKE Family Indicates its Role in Glutamate Triggered Calcium Flux in Rice Roots.
Tripathy M.K., Tiwari B.S., Reddy M.K., Deswal R., Sopory S.K.
Protoplasma 2015   
Ectopic expression of PgRab7 in rice plants (Oryza sativa L.) results in differential tolerance at the vegetative and seed setting stage during salinity and drought stress.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Li,J., Zhu,S., Song,X., Shen,Y., Chen,H., Yu,J., Yi,K., Liu,Y., Karplus,V.J., Wu,P. and Deng,X.W.
Plant Cell 2006  18(2)  340-349
A Rice Glutamate Receptor-Like Gene Is Critical for the Division and Survival of Individual Cells in the Root Apical Meristem
TextPresso Search Search textpresso for GLR3.1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology ionotropic glutamate receptor activity( GO:0004970 )
extracellular-glutamate-gated ion channel activity( GO:0005234 )
ion transport( GO:0006811 )
response to stress( GO:0006950 )
outer membrane-bounded periplasmic space( GO:0030288 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
membrane( GO:0016020 )
integral to membrane( GO:0016021 )
plasma membrane( GO:0005886 )
response to brassinosteroid stimulus( GO:0009741 )
response to cytokinin stimulus( GO:0009735 )
response to abscisic acid stimulus( GO:0009737 )
response to gibberellin stimulus( GO:0009739 )
response to jasmonic acid stimulus( GO:0009753 )
response to cold( GO:0009409 )
response to flooding( GO:0009413 )
response to cadmium ion( GO:0046686 )
Trait Ontology salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
root thickness( TO:0000306 )
brassinosteroid sensitivity( TO:0002677 )
cytokinin sensitivity( TO:0000167 )
abscisic acid sensitivity( TO:0000615 )
gibberellic acid sensitivity( TO:0000166 )
jasmonic acid sensitivity( TO:0000172 )
cold tolerance( TO:0000303 )
flooding related trait( TO:0000114 )
seed set percent( TO:0000455 )
1000-seed weight( TO:0000382 )
panicle number( TO:0000152 )
panicle length( TO:0000040 )
plant height( TO:0000207 )
Plant Ontology leaf( PO:0025034 )
seed( PO:0009010 )
Related Strains
Phenotype images
Last updated
Nov 30, 2023