Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | CPT1 |
| Gene Symbol Synonym | cpt1, OsBTBN2, BTBN2 |
| CGSNL Gene Name | COLEOPTILE PHOTOTROPISM 1 |
| Gene Name Synonym | coleoptile phototropism1, Coleoptile phototropism protein 1, Non-phototropic hypocotyl 3-like protein, NPH3-like protein, NPH3-like, BTB-type E3 ubiquitin ligase N2 |
| Protein Name | COLEOPTILE PHOTOTROPISM PROTEIN 1 |
| Allele | |
| Chromosome No. | 2 |
| Explanation | Os02g0568200. LOC_Os02g35970. Q5KS50. PO:0020033; coleoptile ; PO:0009005; root. GRO:0007047; 02-seedling. |
| Trait Class |
Vegetative organ - Leaf
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AB186127
|
| MSU ID |
LOC_Os02g35970.1
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| RAP ID |
Os02g0568200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Haga,K., Takano,M., Neumann,R. and Iino,M.
Plant Cell 2005 17(1) 103-115 The Rice COLEOPTILE PHOTOTROPISM1 Gene Encoding an Ortholog of Arabidopsis NPH3 Is Required for Phototropism of Coleoptiles and Lateral Translocation of Auxin.
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| TextPresso Search | Search textpresso for CPT1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | GR:0080030 |
| Ontologies | |
| Gene Ontology |
signal transducer activity( GO:0004871 )
response to light stimulus( GO:0009416 ) phototropism( GO:0009638 ) protein binding( GO:0005515 ) |
| Trait Ontology |
phototropism( TO:0002650 )
root phototropism( TO:0002652 ) blue light sensitivity( TO:0000159 ) light sensitivity( TO:0000075 ) shoot phototropism( TO:0002651 ) red light sensitivity( TO:0000158 ) |
| Plant Ontology |
root( PO:0009005 )
coleoptile( PO:0020033 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Feb 1, 2023 | |
